RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 FAM167A-AS1Q96KT0 104 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 IGF2BP2-AS1Q96M15 143 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 AQP10Q96PS8 301 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 TMEM208Q9BTX3 173 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 CELA1Q9UNI1 258 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 FUT9Q9Y231 359 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 TIMM9Q9Y5J7 89 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 RFNGQ9Y644 331 aa8.53□□□□□ -1.04
RAB5C-204ENST00000547517 TRAV12-2A0A075B6T6 113 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 FXYD6-FXYD2A0A087WZ82 144 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 PRAC2D3DTV9 90 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 ZNF253O75346 499 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 OR10J4P0C629 311 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 EMP1P54849 157 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 TCTE3Q8IZS6 198 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 OR2T35Q8NGX2 323 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 OR10J6PQ8NGY7 276 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 NEU1Q99519 415 aa8.52□□□□□ -1.05
RAB5C-204ENST00000547517 PARD6GQ9BYG4 376 aaPredicted RBP8.52□□□□□ -1.05
RAB5C-204ENST00000547517 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.05
RAB5C-204ENST00000547517 TENM2Q9NT68 2774 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 M0R3E3 92 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 CRXO43186 299 aaPredicted RBP8.51□□□□□ -1.05
RAB5C-204ENST00000547517 OR7C2O60412 319 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 NDUFB4O95168 129 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 HBE1P02100 147 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 PDE6HQ13956 83 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 ZNF266Q14584 549 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 ZNF767PQ75MW2 155 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 PAXXQ9BUH6 204 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 OR51M1Q9H341 326 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 HYDINQ4G0P3 5121 aa8.51□□□□□ -1.05
RAB5C-204ENST00000547517 LOC102723971A0A1B0GUV8 181 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 SMIM9A6NGZ8 99 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 EIF3GO75821 320 aaKnown RBP eCLIP8.5□□□□□ -1.05
RAB5C-204ENST00000547517 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
RAB5C-204ENST00000547517 RRN3P1Q2M238 152 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 KHDC3LQ587J8 217 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 Q6ZTC4 211 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 EXOC3-AS1Q8N2X6 119 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 HSD17B11Q8NBQ5 300 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 INO80EQ8NBZ0 244 aaPredicted RBP8.5□□□□□ -1.05
RAB5C-204ENST00000547517 FXYD5Q96DB9 178 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 MRPL53Q96EL3 112 aaKnown RBP8.5□□□□□ -1.05
RAB5C-204ENST00000547517 PHYHIPLQ96FC7 376 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 AAMDCQ9H7C9 122 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 DNAH1Q9P2D7 4330 aa8.5□□□□□ -1.05
RAB5C-204ENST00000547517 TMEM189A5PLL7 270 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 RNF222A6NCQ9 220 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 J3KRW8 73 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 NBEAP1P0C6P0 100 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 CDKN1BP46527 198 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 TAS2R45P59539 299 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 RAB2AP61019 212 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 ICAM4Q14773 271 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 ACOT6Q3I5F7 207 aaPredicted RBP8.49□□□□□ -1.05
RAB5C-204ENST00000547517 FAM122CQ6P4D5 195 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 RPP25LQ8N5L8 163 aaKnown RBP8.49□□□□□ -1.05
RAB5C-204ENST00000547517 RNF141Q8WVD5 230 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 PRELID1Q9Y255 219 aa8.49□□□□□ -1.05
RAB5C-204ENST00000547517 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
RAB5C-204ENST00000547517 NPIPB6E9PJ23 425 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 G3V3Q6 166 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 PRM2P04554 102 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 M6PRP20645 277 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 ZNF503Q96F45 646 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 ST6GAL2Q96JF0 529 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 TNFSF18Q9UNG2 199 aa8.48□□□□□ -1.05
RAB5C-204ENST00000547517 YTHDF2Q9Y5A9 579 aaKnown RBP8.48□□□□□ -1.05
RAB5C-204ENST00000547517 IGKV2-40A0A087WW87 121 aaPredicted RBP8.47□□□□□ -1.05
RAB5C-204ENST00000547517 TRAV10A0A0B4J240 114 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 A0A1W2PPV4 95 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 C11orf94C9JXX5 98 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 SMLR1H3BR10 107 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 IGKV2D-40P01614 121 aaPredicted RBP8.47□□□□□ -1.05
RAB5C-204ENST00000547517 C1QBP02746 253 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 SPART-AS1P0CW21 52 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 CT45A10P0DMU9 189 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 ATP6V0CP27449 155 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 TSPOP30536 169 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 LEPP41159 167 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 ERCC8Q13216 396 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 KIR3DS1Q14943 382 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 FAM222AQ5U5X8 452 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 GFI1BQ5VTD9 330 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 OR10G9Q8NGN4 311 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 OR10G7Q8NGN6 311 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 C2CD4CQ8TF44 421 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 LINC00476Q8WZB0 136 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 HYLS1Q96M11 299 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 LINC01587Q99440 93 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 SH3BGRL3Q9H299 93 aa8.47□□□□□ -1.05
RAB5C-204ENST00000547517 TEX48A0A1B0GUV7 120 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 HMGB3O15347 200 aaKnown RBP8.46□□□□□ -1.06
RAB5C-204ENST00000547517 ARPC5O15511 151 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 LY6G6CO95867 125 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 HTN1P15515 57 aa8.46□□□□□ -1.06
RAB5C-204ENST00000547517 CDC34P49427 236 aaPredicted RBP8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms