RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 EFNA4P52798 201 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 Q8N6K4 173 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 TAF9BQ9HBM6 251 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 ATPIF1Q9UII2 106 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 V9GYQ6 96 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 CASP8AP2Q9UKL3 1982 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 CNTRLQ7Z7A1 2325 aa1.43□□□□□ -2.18
LEMD3-206ENST00000545026 SNRNP200O75643 2136 aaKnown RBP1.42□□□□□ -2.18
LEMD3-206ENST00000545026 A0A1W2PRE2 83 aa1.42□□□□□ -2.18
LEMD3-206ENST00000545026 KPNA4O00629 521 aaPredicted RBP1.42□□□□□ -2.18
LEMD3-206ENST00000545026 ISOC1Q96CN7 298 aa1.42□□□□□ -2.18
LEMD3-206ENST00000545026 TRAPPC8Q9Y2L5 1435 aa1.41□□□□□ -2.18
LEMD3-206ENST00000545026 GABARAPH6UMI1 98 aa1.41□□□□□ -2.18
LEMD3-206ENST00000545026 MT-ND6P03923 174 aa1.41□□□□□ -2.18
LEMD3-206ENST00000545026 CIRBPQ14011 172 aaKnown RBP1.41□□□□□ -2.18
LEMD3-206ENST00000545026 MYO18AQ92614 2054 aaKnown RBP1.4□□□□□ -2.19
LEMD3-206ENST00000545026 PPYP01298 95 aa1.4□□□□□ -2.19
LEMD3-206ENST00000545026 ANGPTL5Q86XS5 388 aa1.4□□□□□ -2.19
LEMD3-206ENST00000545026 PSMF1Q92530 271 aa1.4□□□□□ -2.19
LEMD3-206ENST00000545026 CENPHQ9H3R5 247 aa1.4□□□□□ -2.19
LEMD3-206ENST00000545026 A0A1B0GV72 72 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 JMJD7-PLA2G4BH0Y9G9 81 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 BCL2P10415 239 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 FOXI2Q6ZQN5 318 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 DIRC1Q969H9 104 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 MCEEQ96PE7 176 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 CCDC32Q9BV29 185 aa1.39□□□□□ -2.19
LEMD3-206ENST00000545026 ZCCHC11Q5TAX3 1644 aaKnown RBP1.39□□□□□ -2.19
LEMD3-206ENST00000545026 PHRF1Q9P1Y6 1649 aaKnown RBP1.39□□□□□ -2.19
LEMD3-206ENST00000545026 SIP14410 1827 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 ASCC3Q8N3C0 2202 aaKnown RBP1.38□□□□□ -2.19
LEMD3-206ENST00000545026 PGRMC1O00264 195 aaKnown RBP1.38□□□□□ -2.19
LEMD3-206ENST00000545026 FABP2P12104 132 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 S100A11P31949 105 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 MIR22HGQ0VDD5 57 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 CCL4L1Q8NHW4 92 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 RMND5BQ96G75 393 aaPredicted RBP1.38□□□□□ -2.19
LEMD3-206ENST00000545026 WFDC10AQ9H1F0 79 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 KIAA1107Q9UPP5 1409 aa1.38□□□□□ -2.19
LEMD3-206ENST00000545026 MED12Q93074 2177 aa1.37□□□□□ -2.19
LEMD3-206ENST00000545026 LINC00269Q8N2A0 174 aa1.37□□□□□ -2.19
LEMD3-206ENST00000545026 LAMTOR2Q9Y2Q5 125 aa1.37□□□□□ -2.19
LEMD3-206ENST00000545026 TPRKBQ9Y3C4 175 aa1.37□□□□□ -2.19
LEMD3-206ENST00000545026 LAMA4Q16363 1823 aa1.37□□□□□ -2.19
LEMD3-206ENST00000545026 PBRM1Q86U86 1689 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 EML5Q05BV3 1969 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 PFDN1O60925 122 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 FABP4P15090 132 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 MRPS36P82909 103 aaKnown RBP1.36□□□□□ -2.19
LEMD3-206ENST00000545026 OR4C12Q96R67 309 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 CST11Q9H112 138 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 TCEAL2Q9H3H9 227 aaPredicted RBP1.36□□□□□ -2.19
LEMD3-206ENST00000545026 TET1Q8NFU7 2136 aa1.36□□□□□ -2.19
LEMD3-206ENST00000545026 ERBINQ96RT1 1412 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 E7EQ34 232 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 DIAPH2-AS1Q14236 149 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 VMA21Q3ZAQ7 101 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 HRCT1Q6UXD1 115 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 OR4B1Q8NGF8 309 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 THEM6Q8WUY1 208 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 HSPB8Q9UJY1 196 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 NOTCH1P46531 2555 aa1.35□□□□□ -2.19
LEMD3-206ENST00000545026 PTPRFP10586 1907 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 A0A096LPI6 279 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 IFNA21P01568 189 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 IGHV3-33P01772 117 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 SDC2P34741 201 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 TFAMQ00059 246 aaKnown RBP1.34□□□□□ -2.19
LEMD3-206ENST00000545026 ZCCHC23Q6ZST2 131 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 OR5H6Q8NGV6 325 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 SELENOSQ9BQE4 189 aa1.34□□□□□ -2.19
LEMD3-206ENST00000545026 CHD3Q12873 2000 aaKnown RBP1.33□□□□□ -2.2
LEMD3-206ENST00000545026 SPATA45Q537H7 98 aa1.33□□□□□ -2.2
LEMD3-206ENST00000545026 GLIPR1L1Q6UWM5 242 aa1.33□□□□□ -2.2
LEMD3-206ENST00000545026 SBSPONQ8IVN8 264 aa1.33□□□□□ -2.2
LEMD3-206ENST00000545026 EFCAB11Q9BUY7 163 aa1.33□□□□□ -2.2
LEMD3-206ENST00000545026 NIT2Q9NQR4 276 aa1.33□□□□□ -2.2
LEMD3-206ENST00000545026 MED31Q9Y3C7 131 aa1.33□□□□□ -2.2
LEMD3-206ENST00000545026 LINC00575Q6W349 94 aa1.32□□□□□ -2.2
LEMD3-206ENST00000545026 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.32□□□□□ -2.2
LEMD3-206ENST00000545026 PRELID3AQ96N28 172 aa1.32□□□□□ -2.2
LEMD3-206ENST00000545026 FBN2P35556 2912 aa1.32□□□□□ -2.2
LEMD3-206ENST00000545026 ZNF469Q96JG9 3925 aaPredicted RBP1.31□□□□□ -2.2
LEMD3-206ENST00000545026 TRAV23DV6A0A075B6W5 121 aa1.31□□□□□ -2.2
LEMD3-206ENST00000545026 A0A1W2PPM0 123 aa1.31□□□□□ -2.2
LEMD3-206ENST00000545026 IGLV3-1P01715 115 aa1.31□□□□□ -2.2
LEMD3-206ENST00000545026 POLR2HP52434 150 aaKnown RBP1.31□□□□□ -2.2
LEMD3-206ENST00000545026 NDUFA6P56556 154 aa1.31□□□□□ -2.2
LEMD3-206ENST00000545026 DDA1Q9BW61 102 aa1.31□□□□□ -2.2
LEMD3-206ENST00000545026 FAM107AO95990 144 aa1.3□□□□□ -2.2
LEMD3-206ENST00000545026 RPL7P18124 248 aaKnown RBP1.3□□□□□ -2.2
LEMD3-206ENST00000545026 TOMM20LQ6UXN7 152 aa1.3□□□□□ -2.2
LEMD3-206ENST00000545026 LINC00305Q7Z4B0 112 aa1.3□□□□□ -2.2
LEMD3-206ENST00000545026 OR10AC1Q8NH08 325 aa1.3□□□□□ -2.2
LEMD3-206ENST00000545026 TCOF1Q13428 1488 aaKnown RBP1.3□□□□□ -2.2
LEMD3-206ENST00000545026 TRBV27A0A0K0K1C4 114 aa1.29□□□□□ -2.2
LEMD3-206ENST00000545026 CD14P08571 375 aa1.29□□□□□ -2.2
LEMD3-206ENST00000545026 SMIM15Q7Z3B0 74 aa1.29□□□□□ -2.2
LEMD3-206ENST00000545026 TEX29Q8N6K0 151 aa1.29□□□□□ -2.2
LEMD3-206ENST00000545026 GRPEL2Q8TAA5 225 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms