RNA–Protein interactions for RNA: ENST00000544999.2

HOXD8-204, Transcript of homeobox D8, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HOXD8, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8-204ENST00000544999 THAP6Q8TBB0 222 aa12.08□□□□□ -0.48
HOXD8-204ENST00000544999 ZNF586Q9NXT0 402 aa12.08□□□□□ -0.48
HOXD8-204ENST00000544999 TMEM14CQ9P0S9 112 aa12.08□□□□□ -0.48
HOXD8-204ENST00000544999 ZNF705GA8MUZ8 300 aaPredicted RBP12.07□□□□□ -0.48
HOXD8-204ENST00000544999 MPC2O95563 127 aa12.07□□□□□ -0.48
HOXD8-204ENST00000544999 PRB4P10163 310 aaPredicted RBP12.07□□□□□ -0.48
HOXD8-204ENST00000544999 CDKN1BP46527 198 aa12.07□□□□□ -0.48
HOXD8-204ENST00000544999 TMEM256Q8N2U0 113 aa12.07□□□□□ -0.48
HOXD8-204ENST00000544999 RPP25LQ8N5L8 163 aaKnown RBP12.07□□□□□ -0.48
HOXD8-204ENST00000544999 OR10J6PQ8NGY7 276 aa12.07□□□□□ -0.48
HOXD8-204ENST00000544999 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
HOXD8-204ENST00000544999 KCNIP2Q9NS61 270 aa12.07□□□□□ -0.48
HOXD8-204ENST00000544999 KMT2AQ03164 3969 aa12.06□□□□□ -0.48
HOXD8-204ENST00000544999 PRAC2D3DTV9 90 aa12.06□□□□□ -0.48
HOXD8-204ENST00000544999 HIST1H1EP10412 219 aaKnown RBP12.06□□□□□ -0.48
HOXD8-204ENST00000544999 TSPOP30536 169 aa12.06□□□□□ -0.48
HOXD8-204ENST00000544999 TRBV19A0A075B6N1 114 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 PDE6HQ13956 83 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 GCSAMLQ5JQS6 135 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 MRPL53Q96EL3 112 aaKnown RBP12.05□□□□□ -0.48
HOXD8-204ENST00000544999 LINC01587Q99440 93 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 ATP5SQ99766 215 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 C20orf144Q9BQM9 153 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 NDUFAF3Q9BU61 184 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 HSPB11Q9Y547 144 aa12.05□□□□□ -0.48
HOXD8-204ENST00000544999 C17orf112F2Z3M2 114 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 PRM2P04554 102 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 TAS2R60P59551 318 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 DAD1P61803 113 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 FAM210BQ96KR6 192 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 SLC25A2Q9BXI2 301 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 PRELID1Q9Y255 219 aa12.04□□□□□ -0.48
HOXD8-204ENST00000544999 LYRM9A8MSI8 78 aa12.03□□□□□ -0.48
HOXD8-204ENST00000544999 PYYP10082 97 aa12.03□□□□□ -0.48
HOXD8-204ENST00000544999 RPL12P30050 165 aaKnown RBP12.03□□□□□ -0.48
HOXD8-204ENST00000544999 ODF3Q96PU9 254 aa12.03□□□□□ -0.48
HOXD8-204ENST00000544999 MRPL32Q9BYC8 188 aaKnown RBP12.03□□□□□ -0.48
HOXD8-204ENST00000544999 MBD2Q9UBB5 411 aa12.03□□□□□ -0.48
HOXD8-204ENST00000544999 TIMM9Q9Y5J7 89 aa12.03□□□□□ -0.48
HOXD8-204ENST00000544999 PLAC8L1A1L4L8 177 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 NPIPB6E9PJ23 425 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 NDUFB4O95168 129 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 PTTG1O95997 202 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 AZU1P20160 251 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 MIR17HGQ75NE6 70 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 C16orf74Q96GX8 76 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 FAM167A-AS1Q96KT0 104 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 PARD6GQ9BYG4 376 aaPredicted RBP12.02□□□□□ -0.49
HOXD8-204ENST00000544999 ALG5Q9Y673 324 aa12.02□□□□□ -0.49
HOXD8-204ENST00000544999 EPPK1P58107 5090 aaKnown RBP12.01□□□□□ -0.49
HOXD8-204ENST00000544999 H7BYZ3 331 aa12.01□□□□□ -0.49
HOXD8-204ENST00000544999 LEPP41159 167 aa12.01□□□□□ -0.49
HOXD8-204ENST00000544999 BLNKQ8WV28 456 aa12.01□□□□□ -0.49
HOXD8-204ENST00000544999 OR51M1Q9H341 326 aa12.01□□□□□ -0.49
HOXD8-204ENST00000544999 FUT9Q9Y231 359 aa12.01□□□□□ -0.49
HOXD8-204ENST00000544999 M0R3E3 92 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 IFNA5P01569 189 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 P0DMU3 169 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 FAM231AP0DMU4 169 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 FAM231CP0DMU5 169 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 CT45A10P0DMU9 189 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 HTN3P15516 51 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 KIR3DS1Q14943 382 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 GFI1BQ5VTD9 330 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 ZNF493Q6ZR52 646 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 SCGB1C1Q8TD33 95 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 AAMDCQ9H7C9 122 aa12□□□□□ -0.49
HOXD8-204ENST00000544999 NBEAP1P0C6P0 100 aa11.99□□□□□ -0.49
HOXD8-204ENST00000544999 HTN1P15515 57 aa11.99□□□□□ -0.49
HOXD8-204ENST00000544999 EXOC3-AS1Q8N2X6 119 aa11.99□□□□□ -0.49
HOXD8-204ENST00000544999 RNASE8Q8TDE3 154 aaKnown RBP11.99□□□□□ -0.49
HOXD8-204ENST00000544999 TMEM263Q8WUH6 116 aaKnown RBP11.99□□□□□ -0.49
HOXD8-204ENST00000544999 PAXXQ9BUH6 204 aa11.99□□□□□ -0.49
HOXD8-204ENST00000544999 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
HOXD8-204ENST00000544999 DNAH6Q9C0G6 4158 aa11.98□□□□□ -0.49
HOXD8-204ENST00000544999 FFAR4Q5NUL3 377 aa11.98□□□□□ -0.49
HOXD8-204ENST00000544999 LINC00477Q96M19 166 aa11.98□□□□□ -0.49
HOXD8-204ENST00000544999 TIMM8BQ9Y5J9 83 aaPredicted RBP11.98□□□□□ -0.49
HOXD8-204ENST00000544999 BIRC6Q9NR09 4857 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 VPS13DQ5THJ4 4388 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 J3KRW8 73 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 DEFB130BP0DP73 79 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 DEFB130AP0DP74 79 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 ERCC8Q13216 396 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 ICAM4Q14773 271 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 POM121L12Q8N7R1 296 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 RNF141Q8WVD5 230 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 FXYD5Q96DB9 178 aa11.97□□□□□ -0.49
HOXD8-204ENST00000544999 OR7C2O60412 319 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 SLC25A5P05141 298 aaKnown RBP11.96□□□□□ -0.49
HOXD8-204ENST00000544999 OR10J4P0C629 311 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 FCN2Q15485 313 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 TMEM88Q6PEY1 159 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 C9orf47Q6ZRZ4 202 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 CCDC28AQ8IWP9 274 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 FAM19A4Q96LR4 140 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 MED28Q9H204 178 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 WFDC1Q9HC57 220 aa11.96□□□□□ -0.49
HOXD8-204ENST00000544999 TRAV12-3A0A0B4J271 114 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 8803.6 ms