RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 ZNF726P1Q15940 193 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 ACTL10Q5JWF8 245 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 MORN3Q6PF18 240 aaPredicted RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 TRPT1Q86TN4 253 aaKnown RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 RNF182Q8N6D2 247 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 RPUSD4Q96CM3 377 aaKnown RBP8.68□□□□□ -1.02
SNHG1-221ENST00000544983 C20orf173Q96LM9 149 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 ARL2-SNX15V9GYD0 113 aa8.68□□□□□ -1.02
SNHG1-221ENST00000544983 A0A1W2PRE2 83 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 A8MTW9 85 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 H3BTX0 84 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 HBE1P02100 147 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 SNRPCP09234 159 aaKnown RBP8.67□□□□□ -1.02
SNHG1-221ENST00000544983 RANP62826 216 aaKnown RBP8.67□□□□□ -1.02
SNHG1-221ENST00000544983 OR8A1Q8NGG7 326 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 OR10J6PQ8NGY7 276 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 SFT2D1Q8WV19 159 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 C1QTNF4Q9BXJ3 329 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 CSTL1Q9H114 145 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 Q9H3A6 140 aa8.67□□□□□ -1.02
SNHG1-221ENST00000544983 SERTM2A0A1B0GWG4 89 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 KNCNA6PVL3 124 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 AMBPP02760 352 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 FHITP49789 147 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 BLOC1S1P78537 153 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 ICAM4Q14773 271 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 HAGHQ16775 308 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 Q6ZWC4 215 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 SSX7Q7RTT5 188 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 CMTM2Q8TAZ6 248 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 TCEAL7Q9BRU2 100 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 PLA2G2EQ9NZK7 142 aa8.66□□□□□ -1.02
SNHG1-221ENST00000544983 AGRNO00468 2067 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 RBAKDNA6NC62 111 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 PGPA6NDG6 321 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 BOLA2-SMG1P6H3BVE0 249 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 SLC25A5P05141 298 aaKnown RBP8.65□□□□□ -1.02
SNHG1-221ENST00000544983 ZNF124Q15973 351 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 IGFL4Q6B9Z1 124 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 EXOC3-AS1Q8N2X6 119 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 C5orf17Q8NAS9 161 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 LINC00477Q96M19 166 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 ODF3Q96PU9 254 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 TP53TG1Q9Y2A0 90 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 BOLA1Q9Y3E2 137 aa8.65□□□□□ -1.02
SNHG1-221ENST00000544983 FBLL1A6NHQ2 334 aaKnown RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF705FA8MVS1 300 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF705EA8MWA4 302 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 M0R3E3 92 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 RPL35AP18077 110 aaKnown RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 HLA-DMBP28068 263 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 TSPOP30536 169 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 TAGLN2P37802 199 aaKnown RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 CNN1P51911 297 aaKnown RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 FGF8P55075 233 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 HIST1H1AQ02539 215 aaPredicted RBP8.64□□□□□ -1.03
SNHG1-221ENST00000544983 PMS2P11Q13670 270 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 GDF5OSQ5U4N7 250 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 ALKAL2Q6UX46 152 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 SBSPONQ8IVN8 264 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 OR4B1Q8NGF8 309 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 ZMAT4Q9H898 229 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 PPP1R14DQ9NXH3 145 aa8.64□□□□□ -1.03
SNHG1-221ENST00000544983 TRBV7-9A0A0J9YWB2 115 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 NPIPB6E9PJ23 425 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 F6UB75 175 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 K7EQM0 130 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 EIF3GO75821 320 aaKnown RBP eCLIP8.63□□□□□ -1.03
SNHG1-221ENST00000544983 IFNA7P01567 189 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 TEX261Q6UWH6 196 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 C9orf47Q6ZRZ4 202 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 SPATA25Q9BR10 227 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 TXNDC17Q9BRA2 123 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 TM2D3Q9BRN9 247 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 TMPRSS5Q9H3S3 457 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 MANBALQ9NQG1 85 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 LENEPQ9Y5L5 61 aa8.63□□□□□ -1.03
SNHG1-221ENST00000544983 FAM74A7A6NL05 159 aa8.62□□□□□ -1.03
SNHG1-221ENST00000544983 DIRC3C9JPN6 131 aa8.62□□□□□ -1.03
SNHG1-221ENST00000544983 F6UZH7 168 aa8.62□□□□□ -1.03
SNHG1-221ENST00000544983 CA1P00915 261 aaPredicted RBP8.62□□□□□ -1.03
SNHG1-221ENST00000544983 NMBP08949 121 aa8.62□□□□□ -1.03
SNHG1-221ENST00000544983 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
SNHG1-221ENST00000544983 TMEM78Q5T7P6 136 aa8.62□□□□□ -1.03
SNHG1-221ENST00000544983 AMTNQ6UX39 209 aa8.62□□□□□ -1.03
SNHG1-221ENST00000544983 GGTLC3B5MD39 225 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 IFNA1P01562 189 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 CDKN1BP46527 198 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 DEFB1P60022 68 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 ZNF680Q8NEM1 530 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 HIST1H2BAQ96A08 127 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 RNF183Q96D59 192 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 RCHY1Q96PM5 261 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 ATG101Q9BSB4 218 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 EPDR1Q9UM22 224 aa8.61□□□□□ -1.03
SNHG1-221ENST00000544983 SPRY2O43597 315 aa8.6□□□□□ -1.03
SNHG1-221ENST00000544983 IGKV3-20P01619 116 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms