RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 LSM5Q9Y4Y9 91 aaKnown RBP8.34□□□□□ -1.07
GABPB1-206ENST00000543881 LYRM9A8MSI8 78 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 PRAC2D3DTV9 90 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 SLC17A3O00476 420 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 DEFB130BP0DP73 79 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 DEFB130AP0DP74 79 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 CD300CQ08708 224 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 KIR3DS1Q14943 382 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 OPCMLQ14982 345 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 S100A7AQ86SG5 101 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 ZNF431Q8TF32 576 aaPredicted RBP8.33□□□□□ -1.08
GABPB1-206ENST00000543881 LINC01587Q99440 93 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 NUDT15Q9NV35 164 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 LRP1BQ9NZR2 4599 aa8.33□□□□□ -1.08
GABPB1-206ENST00000543881 FAM24AA6NFZ4 105 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 H3BQ15 152 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 L7N2F9 121 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 COX7A2P2O60397 106 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 CST7O76096 145 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 CXCL2P19875 107 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 BTF3P20290 206 aaKnown RBP8.32□□□□□ -1.08
GABPB1-206ENST00000543881 VAMP2P63027 116 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 LCN15Q6UWW0 184 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 PARD6GQ9BYG4 376 aaPredicted RBP8.32□□□□□ -1.08
GABPB1-206ENST00000543881 TRAV5A0A0B4J249 113 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 C5orf51A6NDU8 294 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 IGLC2P0DOY2 106 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 CDKN1BP46527 198 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 CAMLGP49069 296 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 CAV2P51636 162 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 TAS2R60P59551 318 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 IL15RAQ13261 267 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 C10orf113Q5VZT2 155 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 MIC13Q5XKP0 118 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 NRARPQ7Z6K4 114 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 BPIFA4PQ86YQ2 179 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 TMEM256Q8N2U0 113 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 C12orf45Q8N5I9 185 aaPredicted RBP8.32□□□□□ -1.08
GABPB1-206ENST00000543881 SAT2Q96F10 170 aaPredicted RBP8.32□□□□□ -1.08
GABPB1-206ENST00000543881 C2orf50Q96LR7 162 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 SLC50A1Q9BRV3 221 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 PPP1R14DQ9NXH3 145 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 WDR83OSQ9Y284 106 aa8.32□□□□□ -1.08
GABPB1-206ENST00000543881 HTN1P15515 57 aa8.31□□□□□ -1.08
GABPB1-206ENST00000543881 VWC2Q2TAL6 325 aa8.31□□□□□ -1.08
GABPB1-206ENST00000543881 RNASE8Q8TDE3 154 aaKnown RBP8.31□□□□□ -1.08
GABPB1-206ENST00000543881 DNAJC4Q9NNZ3 241 aa8.31□□□□□ -1.08
GABPB1-206ENST00000543881 RNF24Q9Y225 148 aa8.31□□□□□ -1.08
GABPB1-206ENST00000543881 IGSF23A1L1A6 192 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 F5H768 121 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 PTTG1O95997 202 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 H2AFB2P0C5Z0 115 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 FAM3BP58499 235 aaPredicted RBP8.3□□□□□ -1.08
GABPB1-206ENST00000543881 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 C15orf53Q8NAA6 179 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 UQCC1Q9NVA1 299 aa8.3□□□□□ -1.08
GABPB1-206ENST00000543881 CBY3A6NI87 242 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 RAB32Q13637 225 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 GFI1BQ5VTD9 330 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 Q6ZRG5 221 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 TMEM252Q8N6L7 170 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 CCDC32Q9BV29 185 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 NOP10Q9NPE3 64 aaKnown RBP8.29□□□□□ -1.08
GABPB1-206ENST00000543881 LYRM2Q9NU23 88 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-206ENST00000543881 ZNF586Q9NXT0 402 aa8.29□□□□□ -1.08
GABPB1-206ENST00000543881 TIMM8BQ9Y5J9 83 aaPredicted RBP8.29□□□□□ -1.08
GABPB1-206ENST00000543881 NBDYA0A0U1RRE5 68 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 UBE2L5PA0A1B0GUS4 154 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 H7BYZ3 331 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 ATP5G1P05496 136 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 CT45A10P0DMU9 189 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 RPL29P47914 159 aaKnown RBP8.28□□□□□ -1.08
GABPB1-206ENST00000543881 ATP5G3P48201 142 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 SULT1A1P50225 295 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 S100A10P60903 97 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 RAB31Q13636 194 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 ZNF493Q6ZR52 646 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 OR10J6PQ8NGY7 276 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 TMEM263Q8WUH6 116 aaKnown RBP8.28□□□□□ -1.08
GABPB1-206ENST00000543881 ATG101Q9BSB4 218 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 SLC39A9Q9NUM3 307 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 PXMP4Q9Y6I8 212 aa8.28□□□□□ -1.08
GABPB1-206ENST00000543881 APOBP04114 4563 aaKnown RBP8.27□□□□□ -1.09
GABPB1-206ENST00000543881 FAM240BA0A1B0GVZ2 78 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 NUDT3O95989 172 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 PVALBP20472 110 aaPredicted RBP8.27□□□□□ -1.09
GABPB1-206ENST00000543881 S100A11P31949 105 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 BAXQ07812 192 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 SPATA12Q7Z6I5 190 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 OR1L4Q8NGR5 311 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 ZNRF2Q8NHG8 242 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 RNF141Q8WVD5 230 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 C20orf144Q9BQM9 153 aa8.27□□□□□ -1.09
GABPB1-206ENST00000543881 NPIPB6E9PJ23 425 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 J3KRW8 73 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 M0R3E3 92 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 NDUFB4O95168 129 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 FGF7P21781 194 aa8.26□□□□□ -1.09
GABPB1-206ENST00000543881 GUK1Q16774 197 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms