RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 OR2K2Q8NGT1 345 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 SPATA3Q8NHX4 192 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 HIST1H2BAQ96A08 127 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 SPAG8Q99932 426 aaPredicted RBP8.02□□□□□ -1.13
DDB1-221ENST00000543162 MCRIP2Q9BUT9 160 aaKnown RBP8.02□□□□□ -1.13
DDB1-221ENST00000543162 EPDR1Q9UM22 224 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 RPH3ALQ9UNE2 315 aa8.02□□□□□ -1.13
DDB1-221ENST00000543162 IZUMO1RA6ND01 250 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 OR4C46A6NHA9 309 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 PEX7O00628 323 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 SFTA3P0C7M3 94 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 SNRPD3P62318 126 aaKnown RBP8.01□□□□□ -1.13
DDB1-221ENST00000543162 PSG3Q16557 428 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 GUCA2BQ16661 112 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 LCN12Q6JVE5 192 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 ARL6IP6Q8N6S5 226 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 ZNF738Q8NE65 137 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 C11orf52Q96A22 123 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 MRPL53Q96EL3 112 aaKnown RBP8.01□□□□□ -1.13
DDB1-221ENST00000543162 LINC00052Q96N35 136 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 ATG101Q9BSB4 218 aa8.01□□□□□ -1.13
DDB1-221ENST00000543162 TMEM218A2RU14 115 aa8□□□□□ -1.13
DDB1-221ENST00000543162 ZNF705FA8MVS1 300 aaPredicted RBP8□□□□□ -1.13
DDB1-221ENST00000543162 DIRC3C9JPN6 131 aa8□□□□□ -1.13
DDB1-221ENST00000543162 K7EQM0 130 aa8□□□□□ -1.13
DDB1-221ENST00000543162 TCRAP04437 139 aa8□□□□□ -1.13
DDB1-221ENST00000543162 ZNF688P0C7X2 276 aa8□□□□□ -1.13
DDB1-221ENST00000543162 AKR1C3P42330 323 aa8□□□□□ -1.13
DDB1-221ENST00000543162 SOHLH1Q5JUK2 328 aa8□□□□□ -1.13
DDB1-221ENST00000543162 GOLT1AQ6ZVE7 132 aa8□□□□□ -1.13
DDB1-221ENST00000543162 RPUSD4Q96CM3 377 aaKnown RBP8□□□□□ -1.13
DDB1-221ENST00000543162 C20orf173Q96LM9 149 aa8□□□□□ -1.13
DDB1-221ENST00000543162 SERTM2A0A1B0GWG4 89 aa7.99□□□□□ -1.13
DDB1-221ENST00000543162 PRB4P10163 310 aaPredicted RBP7.99□□□□□ -1.13
DDB1-221ENST00000543162 CNN1P51911 297 aaKnown RBP7.99□□□□□ -1.13
DDB1-221ENST00000543162 ZNF674Q2M3X9 581 aa7.99□□□□□ -1.13
DDB1-221ENST00000543162 PSMG4Q5JS54 123 aa7.99□□□□□ -1.13
DDB1-221ENST00000543162 FAM24BQ8N5W8 94 aa7.99□□□□□ -1.13
DDB1-221ENST00000543162 C2CD4CQ8TF44 421 aa7.99□□□□□ -1.13
DDB1-221ENST00000543162 PARLQ9H300 379 aa7.99□□□□□ -1.13
DDB1-221ENST00000543162 NOTCH3Q9UM47 2321 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 IGKV2-40A0A087WW87 121 aaPredicted RBP7.98□□□□□ -1.13
DDB1-221ENST00000543162 TRAV34A0A0B4J273 112 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 ZNF727A8MUV8 499 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 PRAC2D3DTV9 90 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 F8W036 122 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 IGKV2D-40P01614 121 aaPredicted RBP7.98□□□□□ -1.13
DDB1-221ENST00000543162 S100A9P06702 114 aaKnown RBP7.98□□□□□ -1.13
DDB1-221ENST00000543162 IGLL1P15814 213 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 RPL35P42766 123 aaKnown RBP7.98□□□□□ -1.13
DDB1-221ENST00000543162 UBE2G1P62253 170 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 LINC00479Q96M42 142 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 SMIM7Q9BQ49 75 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 DERL1Q9BUN8 251 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 GPR61Q9BZJ8 451 aa7.98□□□□□ -1.13
DDB1-221ENST00000543162 ZNF256Q9Y2P7 627 aaPredicted RBP7.98□□□□□ -1.13
DDB1-221ENST00000543162 VWFP04275 2813 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 KRBOX1C9JBD0 128 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 DEFB131AP59861 70 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 TMEM183BQ1AE95 376 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 FAM74A3Q4VXF1 159 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 PRR31Q5SQ13 230 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 OR10J6PQ8NGY7 276 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 FMC1Q96HJ9 113 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 KLF12Q9Y4X4 402 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 SORL1Q92673 2214 aa7.97□□□□□ -1.13
DDB1-221ENST00000543162 TRAV8-1A0A0A6YYK1 113 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 RBAKDNA6NC62 111 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 FBLL1A6NHQ2 334 aaKnown RBP7.96□□□□□ -1.14
DDB1-221ENST00000543162 ATP6V1G1O75348 118 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 ADCYAP1P18509 176 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 CMC4P56277 68 aaPredicted RBP7.96□□□□□ -1.14
DDB1-221ENST00000543162 TAS2R60P59551 318 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 DEFB1P60022 68 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 FLI1Q01543 452 aaPredicted RBP7.96□□□□□ -1.14
DDB1-221ENST00000543162 BEAN1Q3B7T3 259 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 EBLN2Q6P2I7 272 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 TMEM75Q8N9X5 138 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 OR8A1Q8NGG7 326 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 VGLL1Q99990 258 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 NIPSNAP3BQ9BS92 247 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 SEC11CQ9BY50 192 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 MAP6D1Q9H9H5 199 aa7.96□□□□□ -1.14
DDB1-221ENST00000543162 OR11H12B2RN74 326 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 F6UB75 175 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 WIPF1O43516 503 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 IGLV2-11P01706 119 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 ZNF705DP0CH99 300 aaPredicted RBP7.95□□□□□ -1.14
DDB1-221ENST00000543162 ZNF705BP0CI00 300 aaPredicted RBP7.95□□□□□ -1.14
DDB1-221ENST00000543162 GNG4P50150 75 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 HIST1H1AQ02539 215 aaPredicted RBP7.95□□□□□ -1.14
DDB1-221ENST00000543162 ERCC8Q13216 396 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 TMEM241Q24JQ0 296 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 CENPWQ5EE01 88 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 TMEM78Q5T7P6 136 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 FOXI2Q6ZQN5 318 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 C9orf47Q6ZRZ4 202 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 PRNTQ86SH4 94 aa7.95□□□□□ -1.14
DDB1-221ENST00000543162 Q86TA4 180 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms