RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 VAPAQ9P0L0 249 aa1□□□□□ -2.25
TRAV1-1-201ENST00000542354 BAIAP2Q9UQB8 552 aa1□□□□□ -2.25
TRAV1-1-201ENST00000542354 TRBV20-1A0A075B6N2 111 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 FXYD6-FXYD2A0A087WZ82 144 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 IGHV3-16A0A0C4DH30 117 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 CRYM-AS1A6NIL9 109 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 GABRPO00591 440 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 SLC25A20O43772 301 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 RPP14O95059 124 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 IL4P05112 153 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 KRT8P05787 483 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 FGF6P10767 208 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 IDO1P14902 403 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 CELP19835 753 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 RPL28P46779 137 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 UBE2BP63146 152 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 SELENOWP63302 87 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 ST3GAL4Q11206 333 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 TIMM50Q3ZCQ8 353 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 GAGE2EQ4V326 116 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR2B11Q5JQS5 317 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 IDNKQ5T6J7 187 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR2G6Q5TZ20 316 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 GAGE2AQ6NT46 116 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 Q6ZS49 121 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 KCTD9Q7L273 389 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR8I2Q8N0Y5 310 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 EIF1ADQ8N9N8 165 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR4D10Q8NGI6 311 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR52I1Q8NGK6 324 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR10G8Q8NGN5 311 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 RRNAD1Q96FB5 475 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 HSD17B10Q99714 261 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 IMUPQ9GZP8 106 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 HSPB7Q9UBY9 170 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 GAGE2DQ9UEU5 116 aa0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 RBMX2Q9Y388 322 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 FAM32AQ9Y421 112 aaKnown RBP0.99□□□□□ -2.25
TRAV1-1-201ENST00000542354 IGLV9-49A0A0B4J1Y8 123 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 TRAV8-4A0A0B4J246 113 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 A0A0G2JRQ6 117 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 TRBV4-1A0A0J9YWV2 114 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 LOC107984640A0A0U1RRK4 108 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 A0A1W2PP11 408 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 C9orf92A6NGG3 77 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 J3KRW8 73 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 PDCD6O75340 191 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 TNFAIP8O95379 198 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 IGKV1-17P01599 117 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 P01737 135 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 CD3GP09693 182 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 RD3LP0DJH9 198 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 CD37P11049 281 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 PRKACGP22612 351 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 DCKP27707 260 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 LEPP41159 167 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 GALR1P47211 349 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 HSPA13P48723 471 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 YPEL3P61236 119 aaPredicted RBP0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 SUPT4H1P63272 117 aaKnown RBP0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 CAV1Q03135 178 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 ZNF90Q03938 601 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 TSPAN31Q12999 210 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 SLC35D3Q5M8T2 416 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 Q5VV11 94 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 TRMT10CQ7L0Y3 403 aaKnown RBP0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 RNF182Q8N6D2 247 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 CCDC197Q8NCU1 140 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 OR4X1Q8NH49 305 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 RHOXF1Q8NHV9 184 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 LGALS14Q8TCE9 139 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 GNPDA2Q8TDQ7 276 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 ZNF431Q8TF32 576 aaPredicted RBP0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 PRAC1Q96KF2 57 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 KCNS1Q96KK3 526 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 SPXQ9BT56 116 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 RSG1Q9BU20 258 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 TSSK6Q9BXA6 273 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 KCNK15Q9H427 330 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 CMC2Q9NRP2 79 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 FKBP11Q9NYL4 201 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 IL20Q9NYY1 176 aa0.98□□□□□ -2.25
TRAV1-1-201ENST00000542354 FAM236DA0A1B0GTK5 79 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 A8MWP4 228 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 ANKRD65E5RJM6 399 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 CORTO00230 105 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 MPDU1O75352 247 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 SNAPC5O75971 98 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 SLC25A5P05141 298 aaKnown RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 FAM236CP0DP71 79 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 NQO2P16083 231 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 RAB3AP20336 220 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 PSMB9P28065 219 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 TGFBR1P36897 503 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 TAGLN2P37802 199 aaKnown RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 GSSP48637 474 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 FGF8P55075 233 aaPredicted RBP0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 SMIM11AP58511 58 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 PKIAP61925 76 aa0.97□□□□□ -2.25
TRAV1-1-201ENST00000542354 RPL37P61927 97 aaKnown RBP0.97□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms