RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 EBLN2Q6P2I7 272 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 Q6P435 159 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 C20orf173Q96LM9 149 aa4.92□□□□□ -1.62
PTPRD-214ENST00000540109 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 HAX1O00165 279 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 PRRG2O14669 202 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 IFI27P40305 119 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 PRCDQ00LT1 54 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 FOXI1Q12951 378 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 C1orf195Q5TG92 126 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 PIFOQ8TCI5 191 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 NTN5Q8WTR8 489 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 PLA2G2EQ9NZK7 142 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 NCOA6Q14686 2063 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 UQCRQO14949 82 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 EFNB3Q15768 340 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 ZNF726P1Q15940 193 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 CEND1Q8N111 149 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 FAM57AQ8TBR7 257 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 LIME1Q9H400 295 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 MYMXA0A1B0GTQ4 84 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 TCRBV4S1A1TA0A5B7 111 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 C15orf61A6NNL5 157 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 PYYP10082 97 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 ATP5EP2Q5VTU8 51 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 HRCT1Q6UXD1 115 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 KLF14Q8TD94 323 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 DYNLRB2Q8TF09 96 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 CYYR1Q96J86 154 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 FOXA2Q9Y261 457 aaPredicted RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 SLC25A20O43772 301 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 RBM3P98179 157 aaKnown RBP4.91□□□□□ -1.62
PTPRD-214ENST00000540109 HCP5Q6MZN7 132 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 CHCHD5Q9BSY4 110 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 NCKAP5O14513 1909 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 C12orf74Q32Q52 190 aa4.91□□□□□ -1.62
PTPRD-214ENST00000540109 FAM236AA0A1B0GUQ0 79 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 FAM236BA0A1B0GV22 79 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 A0A1W2PRX2 142 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 LYRM9A8MSI8 78 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 LINC01619G3V211 115 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 UCNP55089 124 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 Q6ZUT4 128 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 TRGV9Q99603 122 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 ZNF71Q9NQZ8 489 aaPredicted RBP4.9□□□□□ -1.62
PTPRD-214ENST00000540109 TRAV40A0A0B4J280 105 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 IGHV1-69DA0A0B4J2H0 117 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 KLK10O43240 276 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 OXLD1Q5BKU9 147 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 PHLDA3Q9Y5J5 127 aa4.9□□□□□ -1.62
PTPRD-214ENST00000540109 NDUFV3P56181 108 aaKnown RBP4.9□□□□□ -1.63
PTPRD-214ENST00000540109 PCP2Q8IVA1 136 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 C9orf106Q8NAJ2 232 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 IDI2-AS1Q9NZ38 188 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 DOCK10Q96BY6 2186 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 ZNF503-AS2A6NEH8 195 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 IGLL5B9A064 214 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 H0YJW9 148 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 MRPS36P82909 103 aaKnown RBP4.9□□□□□ -1.63
PTPRD-214ENST00000540109 FOXC1Q12948 553 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 TMEM219Q86XT9 240 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 PRO1854Q9UHT4 67 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 C17orf98A8MV24 154 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 CCDC179H3BU77 68 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 HTN1P15515 57 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 GATA4P43694 442 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 PSG7Q13046 419 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 DEFB104AQ8WTQ1 72 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 FAM110AQ9BQ89 295 aa4.9□□□□□ -1.63
PTPRD-214ENST00000540109 ALPK2Q86TB3 2170 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 FOXG1P55316 489 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-214ENST00000540109 FGF23Q9GZV9 251 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-214ENST00000540109 TRBV6-1A0A0K0K1D8 114 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 SMKR1H3BMG3 65 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 ATP1A1-AS1Q5TC04 95 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00173Q6ZV60 143 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 SCRT2Q9NQ03 307 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 IGKV3-7A0A075B6H7 116 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 KNCNA6PVL3 124 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 CECR9P0C854 216 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 TREML4Q6UXN2 200 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 ZNF625Q96I27 306 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-214ENST00000540109 TRAV25A0A0B4J276 109 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 SMIM9A6NGZ8 99 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 PRSS46E5RG02 174 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 NDUFC1O43677 76 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 ZNF474Q6S9Z5 364 aaPredicted RBP4.89□□□□□ -1.63
PTPRD-214ENST00000540109 Q8N8P6 123 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 CARD19Q96LW7 228 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 METTL26Q96S19 204 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 C11orf1Q9H5F2 150 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 ZDBF2Q9HCK1 2354 aa4.89□□□□□ -1.63
PTPRD-214ENST00000540109 A0A0U1RRA0 63 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 CENPVL3A0A0U1RRI6 287 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 SPRY3O43610 288 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 MORN5Q5VZ52 161 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 LINC00643Q86TS7 51 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 VSIG2Q96IQ7 327 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 DUX3Q96PT4 197 aa4.88□□□□□ -1.63
PTPRD-214ENST00000540109 SOCS3O14543 225 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms