RNA–Protein interactions for RNA: ENST00000536850.1

SOX5-208, Transcript of SRY-box 5, human

TSL 3

Gene SOX5, Length 606 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX5-208	ENST00000536850	NUP210	Q8TEM1	1887 aa	Predicted RBP	0.97	□□□□□ -2.25
SOX5-208	ENST00000536850	LAMA4	Q16363	1823 aa		0.97	□□□□□ -2.25
SOX5-208	ENST00000536850	TEN1	Q86WV5	123 aa		0.97	□□□□□ -2.25
SOX5-208	ENST00000536850	PSMF1	Q92530	271 aa		0.97	□□□□□ -2.25
SOX5-208	ENST00000536850	RMND5B	Q96G75	393 aa	Predicted RBP	0.97	□□□□□ -2.25
SOX5-208	ENST00000536850	ATPIF1	Q9UII2	106 aa		0.97	□□□□□ -2.25
SOX5-208	ENST00000536850		V9GYQ6	96 aa		0.97	□□□□□ -2.25
SOX5-208	ENST00000536850		H3BRM9	83 aa		0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	GABARAP	H6UMI1	98 aa		0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	KPNA4	O00629	521 aa	Predicted RBP	0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	S100A11	P31949	105 aa		0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	CROCCP2	Q86T23	111 aa		0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	CENPH	Q9H3R5	247 aa		0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	TMEM138	Q9NPI0	162 aa		0.96	□□□□□ -2.26
SOX5-208	ENST00000536850	MT-ND6	P03923	174 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	BCL2	P10415	239 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	EFNA4	P52798	201 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	MIR22HG	Q0VDD5	57 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	HAGHL	Q6PII5	290 aa	Predicted RBP	0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	HRCT1	Q6UXD1	115 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850		Q8N6K4	173 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	PLPP5	Q8NEB5	264 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	OR10AG1	Q8NH19	301 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	ZNF431	Q8TF32	576 aa	Predicted RBP	0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	DIRC1	Q969H9	104 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	ISOC1	Q96CN7	298 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	NIT2	Q9NQR4	276 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	TNFSF18	Q9UNG2	199 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	TRAPPC8	Q9Y2L5	1435 aa		0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	SNRNP200	O75643	2136 aa	Known RBP	0.95	□□□□□ -2.26
SOX5-208	ENST00000536850	ZCCHC11	Q5TAX3	1644 aa	Known RBP	0.94	□□□□□ -2.26
SOX5-208	ENST00000536850		A0A1B0GV72	72 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	NCR3	O14931	201 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	LYRM1	O43325	122 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	FABP2	P12104	132 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	FOXI2	Q6ZQN5	318 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	LINC00269	Q8N2A0	174 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	CCL4L1	Q8NHW4	92 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	SELENOS	Q9BQE4	189 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	CCDC32	Q9BV29	185 aa		0.94	□□□□□ -2.26
SOX5-208	ENST00000536850	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	IFNA21	P01568	189 aa		0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	RPL7	P18124	248 aa	Known RBP	0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	B2M	P61769	119 aa		0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	CIRBP	Q14011	172 aa	Known RBP	0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	TET1	Q8NFU7	2136 aa		0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	THEM6	Q8WUY1	208 aa		0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	EFCAB11	Q9BUY7	163 aa		0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	LAMTOR2	Q9Y2Q5	125 aa		0.93	□□□□□ -2.26
SOX5-208	ENST00000536850	ZFC3H1	O60293	1989 aa	Known RBP	0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	PPY	P01298	95 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	FABP4	P15090	132 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	POLR2H	P52434	150 aa	Known RBP	0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	TFAM	Q00059	246 aa	Known RBP	0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	GLIPR1L1	Q6UWM5	242 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	ZCCHC23	Q6ZST2	131 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	GRPEL2	Q8TAA5	225 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	WFDC10A	Q9H1F0	79 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	MED31	Q9Y3C7	131 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	CIT	O14578	2027 aa		0.92	□□□□□ -2.26
SOX5-208	ENST00000536850	IGLV3-32	A0A0A0MS00	114 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850		E7EQ34	232 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	JMJD7-PLA2G4B	H0Y9G9	81 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	SDC2	P34741	201 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	MRPS36	P82909	103 aa	Known RBP	0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	DIAPH2-AS1	Q14236	149 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	VMA21	Q3ZAQ7	101 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	OR4C12	Q96R67	309 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	DDA1	Q9BW61	102 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	CST11	Q9H112	138 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	TPRKB	Q9Y3C4	175 aa		0.91	□□□□□ -2.26
SOX5-208	ENST00000536850	TANC2	Q9HCD6	1990 aa		0.9	□□□□□ -2.26
SOX5-208	ENST00000536850	KIAA1107	Q9UPP5	1409 aa		0.9	□□□□□ -2.26
SOX5-208	ENST00000536850	PTPRD	P23468	1912 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	FANCM	Q8IYD8	2048 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	LINC00305	Q7Z4B0	112 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	SBSPON	Q8IVN8	264 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	TEX29	Q8N6K0	151 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	OR5H6	Q8NGV6	325 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	MCEE	Q96PE7	176 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	TCEAL2	Q9H3H9	227 aa	Predicted RBP	0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	TRAPPC2L	Q9UL33	140 aa		0.9	□□□□□ -2.27
SOX5-208	ENST00000536850	ERBIN	Q96RT1	1412 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850		A0A096LPI6	279 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	PFDN1	O60925	122 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	IGLV3-1	P01715	115 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	IGHV3-33	P01772	117 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	RPS3	P23396	243 aa	Known RBP eCLIP	0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	TMEM128	Q5BJH2	165 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	SMIM15	Q7Z3B0	74 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	OR4B1	Q8NGF8	309 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	PRELID3A	Q96N28	172 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	LIMD2	Q9BT23	127 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	NDUFAF1	Q9Y375	327 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	CNTRL	Q7Z7A1	2325 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	BCL9	O00512	1426 aa		0.89	□□□□□ -2.27
SOX5-208	ENST00000536850	FER1L6	Q2WGJ9	1857 aa		0.88	□□□□□ -2.27
SOX5-208	ENST00000536850	TCOF1	Q13428	1488 aa	Known RBP	0.88	□□□□□ -2.27
SOX5-208	ENST00000536850	TRAV23DV6	A0A075B6W5	121 aa		0.88	□□□□□ -2.27
SOX5-208	ENST00000536850		H0YJX3	145 aa		0.88	□□□□□ -2.27

Retrieved 100 of 20,778 RNA–protein pairs in 56 ms