RNA–Protein interactions for RNA: ENST00000536850.1

SOX5-208, Transcript of SRY-box 5, human

TSL 3

Gene SOX5, Length 606 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX5-208	ENST00000536850	AEBP2	Q6ZN18	517 aa	Predicted RBP	22.24	■■□□□ 1.15
SOX5-208	ENST00000536850	CHIC1	Q5VXU3	224 aa		21.59	■■□□□ 1.05
SOX5-208	ENST00000536850	SENP3	Q9H4L4	574 aa	Predicted RBP	18.98	■□□□□ 0.63
SOX5-208	ENST00000536850	PHF23	Q9BUL5	403 aa	Predicted RBP	18.93	■□□□□ 0.62
SOX5-208	ENST00000536850	FOXD1	Q16676	465 aa		17.59	■□□□□ 0.41
SOX5-208	ENST00000536850	PLPPR3	Q6T4P5	718 aa		17.47	■□□□□ 0.39
SOX5-208	ENST00000536850	PPP6R1	Q9UPN7	881 aa		16.75	■□□□□ 0.27
SOX5-208	ENST00000536850	ADRA2B	P18089	450 aa		16.73	■□□□□ 0.27
SOX5-208	ENST00000536850	PIAS4	Q8N2W9	510 aa	Predicted RBP	16.55	■□□□□ 0.24
SOX5-208	ENST00000536850	MSH5	O43196	834 aa		16.35	■□□□□ 0.21
SOX5-208	ENST00000536850	SCAF1	Q9H7N4	1312 aa	Known RBP	15.4	■□□□□ 0.06
SOX5-208	ENST00000536850	PPP4R3CP	Q6ZMV5	832 aa		15.35	■□□□□ 0.05
SOX5-208	ENST00000536850	MAPK8IP2	Q13387	824 aa	Predicted RBP	15.21	■□□□□ 0.03
SOX5-208	ENST00000536850	POTED	Q86YR6	584 aa		15.15	■□□□□ 0.02
SOX5-208	ENST00000536850	DMRT2	Q9Y5R5	561 aa		15.11	■□□□□ 0.01
SOX5-208	ENST00000536850	CNKSR2	Q8WXI2	1034 aa		14.99	□□□□□ -0.01
SOX5-208	ENST00000536850	NCBP3	Q53F19	620 aa	Known RBP	14.95	□□□□□ -0.02
SOX5-208	ENST00000536850	KCNA4	P22459	653 aa		14.76	□□□□□ -0.05
SOX5-208	ENST00000536850	RNF216	Q9NWF9	866 aa	Predicted RBP	14.74	□□□□□ -0.05
SOX5-208	ENST00000536850	HOXD11	P31277	338 aa	Predicted RBP	14.73	□□□□□ -0.05
SOX5-208	ENST00000536850	NPM3	O75607	178 aa	Known RBP	14.67	□□□□□ -0.06
SOX5-208	ENST00000536850	DCAF8L1	A6NGE4	600 aa		14.42	□□□□□ -0.1
SOX5-208	ENST00000536850	DNAJC5B	Q9UF47	199 aa		14.35	□□□□□ -0.11
SOX5-208	ENST00000536850	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.05	□□□□□ -0.16
SOX5-208	ENST00000536850	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	14.02	□□□□□ -0.17
SOX5-208	ENST00000536850	RNF39	Q9H2S5	420 aa		13.96	□□□□□ -0.17
SOX5-208	ENST00000536850	SLC4A2	P04920	1241 aa		13.89	□□□□□ -0.19
SOX5-208	ENST00000536850	C1QBP	Q07021	282 aa	Known RBP	13.82	□□□□□ -0.2
SOX5-208	ENST00000536850		U3KPZ7	1027 aa	Predicted RBP	13.76	□□□□□ -0.21
SOX5-208	ENST00000536850	CACNB1	Q02641	598 aa	Predicted RBP	13.72	□□□□□ -0.21
SOX5-208	ENST00000536850	FOXD4L1	Q9NU39	408 aa		13.67	□□□□□ -0.22
SOX5-208	ENST00000536850	MYCN	P04198	464 aa	Predicted RBP	13.6	□□□□□ -0.23
SOX5-208	ENST00000536850	HNRNPUL2-BSCL2	H3BQZ7	746 aa	Predicted RBP	13.59	□□□□□ -0.23
SOX5-208	ENST00000536850	HNRNPUL2	Q1KMD3	747 aa	Known RBP	13.59	□□□□□ -0.23
SOX5-208	ENST00000536850	ZBTB22	O15209	634 aa		13.56	□□□□□ -0.24
SOX5-208	ENST00000536850	APLP2	Q06481	763 aa		13.52	□□□□□ -0.25
SOX5-208	ENST00000536850	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.52	□□□□□ -0.25
SOX5-208	ENST00000536850	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.4	□□□□□ -0.26
SOX5-208	ENST00000536850	CAPN15	O75808	1086 aa		13.39	□□□□□ -0.27
SOX5-208	ENST00000536850	EHMT2	Q96KQ7	1210 aa		13.39	□□□□□ -0.27
SOX5-208	ENST00000536850	CSRNP3	Q8WYN3	585 aa		13.35	□□□□□ -0.27
SOX5-208	ENST00000536850	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.31	□□□□□ -0.28
SOX5-208	ENST00000536850	ATXN8OS	P0DMR3	200 aa		13.26	□□□□□ -0.29
SOX5-208	ENST00000536850	TRH	P20396	242 aa	Predicted RBP	13.26	□□□□□ -0.29
SOX5-208	ENST00000536850	DSG3	P32926	999 aa		13.21	□□□□□ -0.29
SOX5-208	ENST00000536850	ATF5	Q9Y2D1	282 aa	Predicted RBP	13.17	□□□□□ -0.3
SOX5-208	ENST00000536850	ABCB7	O75027	752 aa		13.09	□□□□□ -0.31
SOX5-208	ENST00000536850	POLA2	Q14181	598 aa		13.02	□□□□□ -0.33
SOX5-208	ENST00000536850	ZBTB12	Q9Y330	459 aa	Predicted RBP	12.87	□□□□□ -0.35
SOX5-208	ENST00000536850	FBLN2	P98095	1184 aa		12.72	□□□□□ -0.37
SOX5-208	ENST00000536850	RBM42	Q9BTD8	480 aa	Known RBP	12.65	□□□□□ -0.38
SOX5-208	ENST00000536850	MKRN4P	Q13434	485 aa	Predicted RBP	12.61	□□□□□ -0.39
SOX5-208	ENST00000536850	OSCAR	Q8IYS5	282 aa		12.58	□□□□□ -0.4
SOX5-208	ENST00000536850	SPDYE2B	A6NHP3	402 aa		12.48	□□□□□ -0.41
SOX5-208	ENST00000536850	SPDYE6	P0CI01	402 aa		12.48	□□□□□ -0.41
SOX5-208	ENST00000536850	SPDYE2	Q495Y8	402 aa		12.48	□□□□□ -0.41
SOX5-208	ENST00000536850	AKT1S1	Q96B36	256 aa		12.44	□□□□□ -0.42
SOX5-208	ENST00000536850	ZNF692	Q9BU19	519 aa	Predicted RBP	12.37	□□□□□ -0.43
SOX5-208	ENST00000536850	SSUH2	Q9Y2M2	353 aa		12.34	□□□□□ -0.43
SOX5-208	ENST00000536850	REM2	Q8IYK8	340 aa	Predicted RBP	12.29	□□□□□ -0.44
SOX5-208	ENST00000536850	SPDYE4	A6NLX3	237 aa		12.27	□□□□□ -0.45
SOX5-208	ENST00000536850	PABPN1	Q86U42	306 aa	Known RBP eCLIP	12.19	□□□□□ -0.46
SOX5-208	ENST00000536850	CHRDL2	Q6WN34	429 aa		12.15	□□□□□ -0.46
SOX5-208	ENST00000536850	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.15	□□□□□ -0.46
SOX5-208	ENST00000536850	PITPNM1	O00562	1244 aa		12.14	□□□□□ -0.47
SOX5-208	ENST00000536850	FKBP8	Q14318	412 aa		12.08	□□□□□ -0.48
SOX5-208	ENST00000536850	PROM2	Q8N271	834 aa		12.06	□□□□□ -0.48
SOX5-208	ENST00000536850	CLEC11A	Q9Y240	323 aa		12.05	□□□□□ -0.48
SOX5-208	ENST00000536850	STAG3	Q9UJ98	1225 aa		12.01	□□□□□ -0.49
SOX5-208	ENST00000536850	FXR2	P51116	673 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
SOX5-208	ENST00000536850	POTEH	Q6S545	545 aa		11.97	□□□□□ -0.49
SOX5-208	ENST00000536850	PRR29	P0C7W0	189 aa		11.95	□□□□□ -0.5
SOX5-208	ENST00000536850	PIP4P2	Q8N4L2	257 aa		11.95	□□□□□ -0.5
SOX5-208	ENST00000536850	PRKAR2A	P13861	404 aa	Known RBP	11.83	□□□□□ -0.52
SOX5-208	ENST00000536850	FBXO3	Q9UK99	471 aa		11.77	□□□□□ -0.53
SOX5-208	ENST00000536850	CHADL	Q6NUI6	762 aa		11.75	□□□□□ -0.53
SOX5-208	ENST00000536850	CREBZF	Q9NS37	354 aa		11.74	□□□□□ -0.53
SOX5-208	ENST00000536850	FARP1	Q9Y4F1	1045 aa	Predicted RBP	11.68	□□□□□ -0.54
SOX5-208	ENST00000536850	PLEKHG5	O94827	1062 aa		11.66	□□□□□ -0.54
SOX5-208	ENST00000536850	MIER1	Q8N108	512 aa		11.65	□□□□□ -0.54
SOX5-208	ENST00000536850	PLCD3	Q8N3E9	789 aa		11.62	□□□□□ -0.55
SOX5-208	ENST00000536850	HAX1	O00165	279 aa		11.61	□□□□□ -0.55
SOX5-208	ENST00000536850	MNX1	P50219	401 aa	Predicted RBP	11.59	□□□□□ -0.55
SOX5-208	ENST00000536850	NPM1	P06748	294 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
SOX5-208	ENST00000536850	VASP	P50552	380 aa	Predicted RBP	11.58	□□□□□ -0.56
SOX5-208	ENST00000536850	C19orf67	A6NJJ6	358 aa		11.57	□□□□□ -0.56
SOX5-208	ENST00000536850	ZBTB47	Q9UFB7	747 aa	Predicted RBP	11.56	□□□□□ -0.56
SOX5-208	ENST00000536850	CD44	P16070	742 aa	Known RBP	11.49	□□□□□ -0.57
SOX5-208	ENST00000536850	EVX2	Q03828	476 aa		11.46	□□□□□ -0.57
SOX5-208	ENST00000536850	PAK3	O75914	559 aa	Predicted RBP	11.44	□□□□□ -0.58
SOX5-208	ENST00000536850	SP7	Q8TDD2	431 aa	Predicted RBP	11.44	□□□□□ -0.58
SOX5-208	ENST00000536850	KLHL34	Q8N239	644 aa		11.41	□□□□□ -0.58
SOX5-208	ENST00000536850	ZRANB1	Q9UGI0	708 aa		11.39	□□□□□ -0.59
SOX5-208	ENST00000536850	NUBP1	P53384	320 aa		11.37	□□□□□ -0.59
SOX5-208	ENST00000536850	IFNLR1	Q8IU57	520 aa	Predicted RBP	11.37	□□□□□ -0.59
SOX5-208	ENST00000536850	ZNF579	Q8NAF0	562 aa	Known RBP	11.36	□□□□□ -0.59
SOX5-208	ENST00000536850	RASEF	Q8IZ41	740 aa		11.35	□□□□□ -0.59
SOX5-208	ENST00000536850	CLCN6	P51797	869 aa		11.33	□□□□□ -0.6
SOX5-208	ENST00000536850	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.33	□□□□□ -0.6
SOX5-208	ENST00000536850	SPOCK2	Q92563	424 aa		11.31	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms