RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 SOCS3O14543 225 aa16.55■□□□□ 0.24
PACSIN3-209ENST00000532457 SDF2L1Q9HCN8 221 aa16.55■□□□□ 0.24
PACSIN3-209ENST00000532457 PF4P02776 101 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 BTN1A1Q13410 526 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 GBGT1Q8N5D6 347 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 HIST1H2BAQ96A08 127 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 AURKAIP1Q9NWT8 199 aaPredicted RBP16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 SNAPINO95295 136 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 TMEM241Q24JQ0 296 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 FAM74A3Q4VXF1 159 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 CLRN3Q8NCR9 226 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 C20orf173Q96LM9 149 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 NIPSNAP3BQ9BS92 247 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 AAMDCQ9H7C9 122 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 PEMTQ9UBM1 199 aa16.54■□□□□ 0.24
PACSIN3-209ENST00000532457 DIRC3C9JPN6 131 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 ISLRO14498 428 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 GOLT1AQ6ZVE7 132 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 CMTM2Q8TAZ6 248 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 TCEAL7Q9BRU2 100 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 ATG101Q9BSB4 218 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 NRN1Q9NPD7 142 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 KLF12Q9Y4X4 402 aa16.53■□□□□ 0.24
PACSIN3-209ENST00000532457 PRAC2D3DTV9 90 aa16.52■□□□□ 0.24
PACSIN3-209ENST00000532457 VWFP04275 2813 aa16.52■□□□□ 0.24
PACSIN3-209ENST00000532457 TRAV8-1A0A0A6YYK1 113 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 IGLV2-11P01706 119 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 LCN12Q6JVE5 192 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 OCC1Q8TAD7 63 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 TVP23CQ96ET8 276 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 C16orf92Q96LL3 132 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 SLC50A1Q9BRV3 221 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 NAT8Q9UHE5 227 aa16.52■□□□□ 0.23
PACSIN3-209ENST00000532457 OVOL1O14753 267 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 AKR1C3P42330 323 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 MEOX2P50222 304 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 RPL23P62829 140 aaKnown RBP16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 WFDC3Q8IUB2 231 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 DCANP1Q8TF63 244 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 IGF2BP2-AS1Q96M15 143 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 MS4A6AQ9H2W1 248 aa16.51■□□□□ 0.23
PACSIN3-209ENST00000532457 TMEM183BQ1AE95 376 aa16.5■□□□□ 0.23
PACSIN3-209ENST00000532457 M0R036 132 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 IGLV2-8P01709 118 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 BMI1P35226 326 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 CENPWQ5EE01 88 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 FAM24BQ8N5W8 94 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 ASCL2Q99929 193 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 IGKV2-40A0A087WW87 121 aaPredicted RBP16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 IGKV2D-40P01614 121 aaPredicted RBP16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 CNN1P51911 297 aaKnown RBP16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 DEFB114Q30KQ6 69 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 LINC01551Q86U37 167 aa16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.49■□□□□ 0.23
PACSIN3-209ENST00000532457 K7EN84 100 aa16.48■□□□□ 0.23
PACSIN3-209ENST00000532457 DNASE2O00115 360 aaPredicted RBP16.48■□□□□ 0.23
PACSIN3-209ENST00000532457 TFPI2P48307 235 aa16.48■□□□□ 0.23
PACSIN3-209ENST00000532457 DEFB1P60022 68 aa16.48■□□□□ 0.23
PACSIN3-209ENST00000532457 PSG3Q16557 428 aa16.48■□□□□ 0.23
PACSIN3-209ENST00000532457 C7orf77A4D0Y5 90 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 C9JCJ5 164 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 TAS2R60P59551 318 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 VGLL1Q99990 258 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 CSN1S1P47710 185 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 ADIRFQ15847 76 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 NHLRC2Q8NBF2 726 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 TMA7Q9Y2S6 64 aaKnown RBP16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 SORL1Q92673 2214 aa16.47■□□□□ 0.23
PACSIN3-209ENST00000532457 GNG4P50150 75 aa16.46■□□□□ 0.23
PACSIN3-209ENST00000532457 ARL6IP6Q8N6S5 226 aa16.46■□□□□ 0.23
PACSIN3-209ENST00000532457 PRELID1Q9Y255 219 aa16.46■□□□□ 0.23
PACSIN3-209ENST00000532457 K7EQG2 157 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 ERCC8Q13216 396 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 BAGE2Q86Y30 109 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 TMEM61Q8N0U2 210 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 IZUMO1RA6ND01 250 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 OR5I1Q13606 314 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 CD300EQ496F6 205 aaPredicted RBP16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 PRR31Q5SQ13 230 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 LINC00482Q8N8I6 264 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 FMC1Q96HJ9 113 aa16.45■□□□□ 0.22
PACSIN3-209ENST00000532457 PKD1L1Q8TDX9 2849 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 LTAP01374 205 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 ZNF705DP0CH99 300 aaPredicted RBP16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 ZNF705BP0CI00 300 aaPredicted RBP16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 UBE2G1P62253 170 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 PNRC1Q12796 327 aaPredicted RBP16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 PRNTQ86SH4 94 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 TMEM75Q8N9X5 138 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 MRPL53Q96EL3 112 aaKnown RBP16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 RPS10P5Q9NQ39 176 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 SIGLEC8Q9NYZ4 499 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 PSG8Q9UQ74 426 aa16.44■□□□□ 0.22
PACSIN3-209ENST00000532457 CD33P20138 364 aa16.43■□□□□ 0.22
PACSIN3-209ENST00000532457 DYNLRB2Q8TF09 96 aa16.43■□□□□ 0.22
PACSIN3-209ENST00000532457 MLST8Q9BVC4 326 aa16.43■□□□□ 0.22
PACSIN3-209ENST00000532457 LY96Q9Y6Y9 160 aa16.43■□□□□ 0.22
PACSIN3-209ENST00000532457 S100A9P06702 114 aaKnown RBP16.42■□□□□ 0.22
PACSIN3-209ENST00000532457 FLI1Q01543 452 aaPredicted RBP16.42■□□□□ 0.22
PACSIN3-209ENST00000532457 Q86TA4 180 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms