RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 GCN1Q92616 2671 aaKnown RBP11.72□□□□□ -0.53
SRPRA-206ENST00000532259 IGF1P05019 195 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 LOXL1Q08397 574 aaPredicted RBP11.71□□□□□ -0.53
SRPRA-206ENST00000532259 UNQ9165/PRO28630Q6UXU0 137 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 GBGT1Q8N5D6 347 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 TSKUQ8WUA8 353 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 GTSF1Q8WW33 167 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 ZNF331Q9NQX6 463 aaPredicted RBP11.71□□□□□ -0.53
SRPRA-206ENST00000532259 K7EQM0 130 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 CRISP2P16562 243 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 CSN1S1P47710 185 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 GDF5OSQ5U4N7 250 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 LYPD1Q8N2G4 141 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 OR2D3Q8NGH3 330 aa11.71□□□□□ -0.53
SRPRA-206ENST00000532259 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 CHEK1O14757 476 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 SLAQ13239 276 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 VGLL1Q99990 258 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 TPPP3Q9BW30 176 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 GNB1LQ9BYB4 327 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 IGHG4P01861 327 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 CRIP2P52943 208 aaPredicted RBP11.7□□□□□ -0.54
SRPRA-206ENST00000532259 PDE6HQ13956 83 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 TMEM75Q8N9X5 138 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 METTL26Q96S19 204 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 TP53TG3Q9ULZ0 132 aa11.7□□□□□ -0.54
SRPRA-206ENST00000532259 PRAC2D3DTV9 90 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 CRIP1P50238 77 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 PSG9Q00887 426 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 IL17RELQ6ZVW7 336 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 SETD2Q9BYW2 2564 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-206ENST00000532259 IGKV3-7A0A075B6H7 116 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 FAM223BA6NKX1 122 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 RELQ04864 619 aaPredicted RBP11.69□□□□□ -0.54
SRPRA-206ENST00000532259 ERCC8Q13216 396 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 COA6Q5JTJ3 125 aaKnown RBP11.69□□□□□ -0.54
SRPRA-206ENST00000532259 BAGE3Q86Y29 109 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 FAM223AQ8IWN6 122 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 OR5R1Q8NH85 324 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 PRSS22Q9GZN4 317 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 HECTD1Q9ULT8 2610 aa11.69□□□□□ -0.54
SRPRA-206ENST00000532259 SRIP30626 198 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 BEX4Q9NWD9 120 aaPredicted RBP11.68□□□□□ -0.54
SRPRA-206ENST00000532259 M0QZK8 103 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 SERF1AO75920 110 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 CD33P20138 364 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 WDR73Q6P4I2 378 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 WFDC11Q8NEX6 87 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 OR4X2Q8NGF9 303 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 SMIM12Q96EX1 92 aa11.68□□□□□ -0.54
SRPRA-206ENST00000532259 A8MWL6 223 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 SMAD7O15105 426 aaKnown RBP11.67□□□□□ -0.54
SRPRA-206ENST00000532259 APCSP02743 223 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 LCN12Q6JVE5 192 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 MUC21A0A0G2JKD1 596 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 MUC21A0A140T8X8 626 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 LINC00310P59036 64 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 MUC21Q5SSG8 566 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 ZNF492Q9P255 531 aa11.67□□□□□ -0.54
SRPRA-206ENST00000532259 MTORP42345 2549 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 RAB9AP51151 201 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 ZFP30Q9Y2G7 519 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 J3QLI3 93 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 EDN2P20800 178 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 IQCJQ1A5X6 159 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 RCHY1Q96PM5 261 aa11.66□□□□□ -0.54
SRPRA-206ENST00000532259 NOTCH2Q04721 2471 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 HLA-DQA1P01909 254 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 ZNF705DP0CH99 300 aaPredicted RBP11.65□□□□□ -0.54
SRPRA-206ENST00000532259 ZNF705BP0CI00 300 aaPredicted RBP11.65□□□□□ -0.54
SRPRA-206ENST00000532259 CT45A10P0DMU9 189 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 RPL11P62913 178 aaKnown RBP11.65□□□□□ -0.54
SRPRA-206ENST00000532259 GSN-AS1Q9NRJ2 163 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 AKAP9Q99996 3911 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 FASNP49327 2511 aaKnown RBP11.65□□□□□ -0.54
SRPRA-206ENST00000532259 HOXA3O43365 443 aaPredicted RBP11.65□□□□□ -0.54
SRPRA-206ENST00000532259 FSHBP01225 129 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 MT-ND6P03923 174 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 TMEM18Q96B42 140 aa11.65□□□□□ -0.54
SRPRA-206ENST00000532259 ZNF253O75346 499 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 IGLV1-40P01703 118 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 DEFB1P60022 68 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 CFHR3Q02985 330 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 C8orf86Q6ZUL3 223 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 PSMG3-AS1Q96PY0 264 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 ZNF80P51504 273 aaPredicted RBP11.64□□□□□ -0.55
SRPRA-206ENST00000532259 TM4SF20Q53R12 229 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 RBPMS2Q6ZRY4 209 aaKnown RBP11.64□□□□□ -0.55
SRPRA-206ENST00000532259 LRRC75A-AS1Q8N1F1 130 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 PRR25Q96S07 402 aa11.64□□□□□ -0.55
SRPRA-206ENST00000532259 NPIPB6E9PJ23 425 aa11.63□□□□□ -0.55
SRPRA-206ENST00000532259 SRD5A1P18405 259 aa11.63□□□□□ -0.55
SRPRA-206ENST00000532259 S100A7P31151 101 aa11.63□□□□□ -0.55
SRPRA-206ENST00000532259 FOXA3P55318 350 aaPredicted RBP11.63□□□□□ -0.55
SRPRA-206ENST00000532259 TRAV8-2A0A0B4J237 113 aa11.63□□□□□ -0.55
SRPRA-206ENST00000532259 SH2D1AO60880 128 aa11.63□□□□□ -0.55
SRPRA-206ENST00000532259 HBBP68871 147 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms