RNA–Protein interactions for RNA: ENST00000528910.5

USP35-202, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 1,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-202ENST00000528910 BAP18Q8IXM2 172 aa12.46□□□□□ -0.41
USP35-202ENST00000528910 IGHV3OR16-12A0A075B7B8 117 aa12.45□□□□□ -0.42
USP35-202ENST00000528910 C11orf94C9JXX5 98 aa12.45□□□□□ -0.42
USP35-202ENST00000528910 PRAC2D3DTV9 90 aa12.45□□□□□ -0.42
USP35-202ENST00000528910 Q5BKY6 102 aa12.45□□□□□ -0.42
USP35-202ENST00000528910 PRELID1Q9Y255 219 aa12.45□□□□□ -0.42
USP35-202ENST00000528910 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
USP35-202ENST00000528910 NPIPB6E9PJ23 425 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 HBE1P02100 147 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 PRB4P10163 310 aaPredicted RBP12.44□□□□□ -0.42
USP35-202ENST00000528910 RHOBP62745 196 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 ZNF266Q14584 549 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 OR10J6PQ8NGY7 276 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 LINC00476Q8WZB0 136 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 FXYD5Q96DB9 178 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 ODF3Q96PU9 254 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 OR51M1Q9H341 326 aa12.44□□□□□ -0.42
USP35-202ENST00000528910 G3V3Q6 166 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 M0R3E3 92 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 CDKN1BP46527 198 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 RRN3P1Q2M238 152 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 Q6ZTC4 211 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 ZNF503Q96F45 646 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 PAXXQ9BUH6 204 aa12.43□□□□□ -0.42
USP35-202ENST00000528910 TRAV12-2A0A075B6T6 113 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 TEX48A0A1B0GUV7 120 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 LOC102723971A0A1B0GUV8 181 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 RNF222A6NCQ9 220 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 C12orf74Q32Q52 190 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 KHDC3LQ587J8 217 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 TMEM256Q8N2U0 113 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 OR2T35Q8NGX2 323 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 BLNKQ8WV28 456 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 TMEM208Q9BTX3 173 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 AAMDCQ9H7C9 122 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 PPP1R14DQ9NXH3 145 aa12.42□□□□□ -0.42
USP35-202ENST00000528910 TRAV10A0A0B4J240 114 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 NBEAP1P0C6P0 100 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 M6PRP20645 277 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 TSPOP30536 169 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 TAS2R45P59539 299 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 EXOC3-AS1Q8N2X6 119 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 RPP25LQ8N5L8 163 aaKnown RBP12.41□□□□□ -0.42
USP35-202ENST00000528910 OR2G3Q8NGZ4 309 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 C2CD4CQ8TF44 421 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 RNF141Q8WVD5 230 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 C20orf144Q9BQM9 153 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 PSMG3Q9BT73 122 aaPredicted RBP12.41□□□□□ -0.42
USP35-202ENST00000528910 DKK2Q9UBU2 259 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 TNFSF18Q9UNG2 199 aa12.41□□□□□ -0.42
USP35-202ENST00000528910 OR7C2O60412 319 aa12.4□□□□□ -0.42
USP35-202ENST00000528910 OR10J4P0C629 311 aa12.4□□□□□ -0.42
USP35-202ENST00000528910 SPART-AS1P0CW21 52 aa12.4□□□□□ -0.42
USP35-202ENST00000528910 TCTAP57738 103 aa12.4□□□□□ -0.42
USP35-202ENST00000528910 UBE2L3P68036 154 aaKnown RBP12.4□□□□□ -0.42
USP35-202ENST00000528910 ACOT6Q3I5F7 207 aaPredicted RBP12.4□□□□□ -0.42
USP35-202ENST00000528910 PHYHIPLQ96FC7 376 aa12.4□□□□□ -0.42
USP35-202ENST00000528910 YTHDF2Q9Y5A9 579 aaKnown RBP12.4□□□□□ -0.42
USP35-202ENST00000528910 HYDINQ4G0P3 5121 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 FXYD6-FXYD2A0A087WZ82 144 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 EMP1P54849 157 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 RAB2AP61019 212 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 ICAM4Q14773 271 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 FAM222AQ5U5X8 452 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 HSD17B11Q8NBQ5 300 aa12.39□□□□□ -0.43
USP35-202ENST00000528910 INO80EQ8NBZ0 244 aaPredicted RBP12.39□□□□□ -0.43
USP35-202ENST00000528910 CT45A10P0DMU9 189 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 LEPP41159 167 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 TAS2R60P59551 318 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 GFI1BQ5VTD9 330 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 ZNF767PQ75MW2 155 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 LYPD1Q8N2G4 141 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 FAM19A4Q96LR4 140 aa12.38□□□□□ -0.43
USP35-202ENST00000528910 PLAC8L1A1L4L8 177 aa12.37□□□□□ -0.43
USP35-202ENST00000528910 ZNF705GA8MUZ8 300 aaPredicted RBP12.37□□□□□ -0.43
USP35-202ENST00000528910 ATP6V0CP27449 155 aa12.37□□□□□ -0.43
USP35-202ENST00000528910 PQLC2Q6ZP29 291 aa12.37□□□□□ -0.43
USP35-202ENST00000528910 C9orf47Q6ZRZ4 202 aa12.37□□□□□ -0.43
USP35-202ENST00000528910 KLLNB2CW77 178 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 H7BYZ3 331 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 FAM122CQ6P4D5 195 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 LINC00477Q96M19 166 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 LINC01587Q99440 93 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 NIPSNAP3BQ9BS92 247 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 Q9H3A6 140 aa12.36□□□□□ -0.43
USP35-202ENST00000528910 IGKV2-40A0A087WW87 121 aaPredicted RBP12.35□□□□□ -0.43
USP35-202ENST00000528910 DEFB131BA0A096LNP1 70 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 EIF3GO75821 320 aaKnown RBP eCLIP12.35□□□□□ -0.43
USP35-202ENST00000528910 IGKV2D-40P01614 121 aaPredicted RBP12.35□□□□□ -0.43
USP35-202ENST00000528910 PRM2P04554 102 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 CRISP2P16562 243 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 CDC34P49427 236 aaPredicted RBP12.35□□□□□ -0.43
USP35-202ENST00000528910 SERF2P84101 59 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 ERCC8Q13216 396 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 LGALS9CQ6DKI2 356 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 OR10G4Q8NGN3 311 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 OR10G9Q8NGN4 311 aa12.35□□□□□ -0.43
USP35-202ENST00000528910 OR10G7Q8NGN6 311 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms