RNA–Protein interactions for RNA: ENST00000528475.1

GSDMD-208, Transcript of gasdermin D, human

TSL 2

Gene GSDMD, Length 2,067 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GSDMD-208	ENST00000528475	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	18.23	■□□□□ 0.51
GSDMD-208	ENST00000528475	IGKV2D-40	P01614	121 aa	Predicted RBP	18.23	■□□□□ 0.51
GSDMD-208	ENST00000528475	EGR2	P11161	476 aa	Predicted RBP	18.23	■□□□□ 0.51
GSDMD-208	ENST00000528475	REL	Q04864	619 aa	Predicted RBP	18.23	■□□□□ 0.51
GSDMD-208	ENST00000528475	CDSN	Q15517	529 aa		18.23	■□□□□ 0.51
GSDMD-208	ENST00000528475	MPV17L2	Q567V2	206 aa		18.23	■□□□□ 0.51
GSDMD-208	ENST00000528475	TMEM213	A2RRL7	107 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475		D6R8Y8	96 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	IFI27	P40305	119 aa	Predicted RBP	18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	C12orf54	Q6X4T0	127 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	ORMDL3	Q8N138	153 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	SIGLEC8	Q9NYZ4	499 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	TP73-AS1	Q9UF72	201 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	SMAD5-AS1	Q9Y6J3	95 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	KALRN	O60229	2985 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475		A0A096LNJ9	63 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	BMI1	P35226	326 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	BVES-AS1	Q5T3Y7	98 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	PRELID3A	Q96N28	172 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	PMCHL2	Q9BQD1	86 aa		18.22	■□□□□ 0.51
GSDMD-208	ENST00000528475	IGHV7-81	A0A0B4J1V7	117 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	OR2T8	A6NH00	312 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	TMEM11	P17152	192 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	KLK9	Q2XQG4	91 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475		Q6ZVH6	145 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	DPF1	Q92782	380 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	MCRIP2	Q9BUT9	160 aa	Known RBP	18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	KLK9	Q9UKQ9	250 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	PIEZO2	Q9H5I5	2752 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	AMN1	Q8IY45	258 aa		18.21	■□□□□ 0.51
GSDMD-208	ENST00000528475	PTPRQ	Q9UMZ3	2332 aa		18.2	■□□□□ 0.5
GSDMD-208	ENST00000528475	TMSB15B	A0A087X1C1	80 aa		18.2	■□□□□ 0.5
GSDMD-208	ENST00000528475	NUDT3	O95989	172 aa		18.2	■□□□□ 0.5
GSDMD-208	ENST00000528475	IGHV3-23	P01764	117 aa		18.2	■□□□□ 0.5
GSDMD-208	ENST00000528475	IGHG4	P01861	327 aa		18.2	■□□□□ 0.5
GSDMD-208	ENST00000528475	IGLC6	P0CF74	106 aa		18.2	■□□□□ 0.5
GSDMD-208	ENST00000528475		H0Y8G0	127 aa		18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	COX8A	P10176	69 aa		18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	HIST1H1A	Q02539	215 aa	Predicted RBP	18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	MRPL51	Q4U2R6	128 aa	Known RBP	18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	DTX2	Q86UW9	622 aa		18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	ZZEF1	O43149	2961 aa		18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475		Q8N9W7	124 aa		18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	ARHGAP32	A7KAX9	2087 aa		18.19	■□□□□ 0.5
GSDMD-208	ENST00000528475	NCR2	O95944	276 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	FAM106CP	P0CH98	169 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	FAM106A	Q4KMX7	169 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	FER1L6-AS1	Q8NA97	138 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	SIRPD	Q9H106	197 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	IGHV2-70D	A0A0C4DH43	119 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	DEFB125	Q8N687	156 aa		18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	FAM110D	Q8TAY7	271 aa	Predicted RBP	18.18	■□□□□ 0.5
GSDMD-208	ENST00000528475	ANKHD1	Q8IWZ3	2542 aa	Known RBP	18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475		A0A087X0K7	114 aa		18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	ZNF80	P51504	273 aa	Predicted RBP	18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	PAX8	Q06710	450 aa		18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	LOXL1	Q08397	574 aa	Predicted RBP	18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	KLRB1	Q12918	225 aa		18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	LGALS9B	Q3B8N2	356 aa		18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	LGALS9C	Q6DKI2	356 aa		18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	VGLL1	Q99990	258 aa		18.17	■□□□□ 0.5
GSDMD-208	ENST00000528475	ZFP36	P26651	326 aa	Known RBP	18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	RAB9A	P51151	201 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	PSMG3-AS1	Q96PY0	264 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	NPFFR1	Q9GZQ6	430 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	LOC389332	A0A1B0GUA5	103 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	TAX1BP3	O14907	124 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	SFTPC	P11686	197 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	ZNF575	Q86XF7	245 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	ZNF502	Q8TBZ5	544 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	CNFN	Q9BYD5	112 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475	CBY1	Q9Y3M2	126 aa		18.16	■□□□□ 0.5
GSDMD-208	ENST00000528475		Q8TAT8	98 aa		18.15	■□□□□ 0.5
GSDMD-208	ENST00000528475	HBD	P02042	147 aa		18.14	■□□□□ 0.49
GSDMD-208	ENST00000528475	OR1N2	Q8NGR9	330 aa		18.14	■□□□□ 0.49
GSDMD-208	ENST00000528475	RBAKDN	A6NC62	111 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	GPR183	P32249	361 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	TWIST1	Q15672	202 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	PIP4P2	Q8N4L2	257 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	ZFAND3	Q9H8U3	227 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	MUC21	A0A0G2JKD1	596 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	MUC21	A0A140T8X8	626 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	HLA-DMB	P28068	263 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	CKS2	P33552	79 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	RHOG	P84095	191 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	MUC21	Q5SSG8	566 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	C2orf91	Q6ZV80	131 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	OR8A1	Q8NGG7	326 aa		18.13	■□□□□ 0.49
GSDMD-208	ENST00000528475	FABP5P3	A8MUU1	101 aa		18.12	■□□□□ 0.49
GSDMD-208	ENST00000528475		K7EP13	123 aa		18.12	■□□□□ 0.49
GSDMD-208	ENST00000528475	CD5L	O43866	347 aa		18.12	■□□□□ 0.49
GSDMD-208	ENST00000528475	NPY	P01303	97 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	IGFL4	Q6B9Z1	124 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	LINC01546	A6NGU7	62 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	BUB3	O43684	328 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	PPBP	P02775	128 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	UBE2E1	P51965	193 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	C15orf32	Q32M92	178 aa		18.11	■□□□□ 0.49
GSDMD-208	ENST00000528475	AJUBA	Q96IF1	538 aa		18.11	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 596.4 ms