RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CRYBA1P05813 215 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 OR10J4P0C629 311 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 OR8U9P0C7N5 309 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 CT45A6P0DMU7 189 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 CT45A5P0DMU8 189 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 CT45A7P0DMV0 189 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 BRS3P32247 399 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 TFPI2P48307 235 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 BLCAPP62952 87 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 HES1Q14469 280 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 RPL39P5Q59GN2 51 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 Q6ZS49 121 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 COMMD7Q86VX2 200 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 Q8N2B8 174 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 CYB561D1Q8N8Q1 229 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 ZNF738Q8NE65 137 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 OR4C13Q8NGP0 309 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 S100A16Q96FQ6 103 aaKnown RBP2.39□□□□□ -2.03
CD44-219ENST00000525685 NARS2Q96I59 477 aaKnown RBP2.39□□□□□ -2.03
CD44-219ENST00000525685 ABHD14BQ96IU4 210 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 OR5B12Q96R08 314 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 NABP2Q9BQ15 211 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 AGMATQ9BSE5 352 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 SLIRPQ9GZT3 109 aaKnown RBP2.39□□□□□ -2.03
CD44-219ENST00000525685 FXYD6Q9H0Q3 95 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 OR2D2Q9H210 308 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 C16orf95Q9H693 158 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 BEX1Q9HBH7 125 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 MED9Q9NWA0 146 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 MCUBQ9NWR8 336 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 SHPKQ9UHJ6 478 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 SCP2D1Q9UJQ7 156 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 SIGLEC9Q9Y336 463 aa2.39□□□□□ -2.03
CD44-219ENST00000525685 KIAA2026Q5HYC2 2103 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 WNK2Q9Y3S1 2297 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 SETD2Q9BYW2 2564 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 IGKV1D-13A0A0B4J2D9 117 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 OR5H14A6NHG9 310 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 H0YJW9 148 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 J3QRK9 145 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 M0R143 59 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 M0R1X1 148 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 DNASE2O00115 360 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 FGF16O43320 207 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 TMEM50AO95807 157 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 IGKV1-13P0DP09 117 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 HIST1H1BP16401 226 aaKnown RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 AKR1C4P17516 323 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 NFYAP23511 347 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 CNTFRP26992 372 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 PRSS3P35030 304 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 LINC00315P59091 139 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 ZNF616Q08AN1 781 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 EIF4EBP1Q13541 118 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 ZNF846Q147U1 533 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 ABCA11PQ4W5N1 156 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 ZNF660Q6AZW8 331 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 FAM131AQ6UXB0 335 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 LINC00173Q6ZV60 143 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 SNX29P2Q8IUI4 249 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 ZNF645Q8N7E2 425 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 C3orf56Q8N813 242 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 C5orf56Q8N8D9 126 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 OR2T10Q8NGZ9 312 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 OR8U1Q8NH10 309 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 OR4S2Q8NH73 311 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 MCFD2Q8NI22 146 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 ZFAND1Q8TCF1 268 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 RBPMSQ93062 196 aaKnown RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 HSPB9Q9BQS6 159 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 GINS4Q9BRT9 223 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 WFDC1Q9HC57 220 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 SPANXA1Q9NS26 97 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 METTL1Q9UBP6 276 aaKnown RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 HSPB11Q9Y547 144 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 SVEP1Q4LDE5 3571 aa2.38□□□□□ -2.03
CD44-219ENST00000525685 SONP18583 2426 aaKnown RBP2.38□□□□□ -2.03
CD44-219ENST00000525685 ANK2Q01484 3957 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 NAV3Q8IVL0 2385 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 SEC14L6B5MCN3 397 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 GABARAPH6UMI1 98 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 K7ERU9 68 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 ZNF324O75467 553 aaPredicted RBP2.37□□□□□ -2.03
CD44-219ENST00000525685 NDUFA3O95167 84 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 MT-CO2P00403 227 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 PPYP01298 95 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 IGLV2-23P01705 113 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 IGHG2P01859 326 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 HLA-DRB1P01911 266 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 APOA2P02652 100 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 PMP2P02689 132 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 ORM1P02763 201 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 IGKV1-16P04430 117 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 OR5H8P0DN80 308 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 CD28P10747 220 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 PMCHP20382 165 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 F2RP25116 425 aa2.37□□□□□ -2.03
CD44-219ENST00000525685 S100GP29377 79 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms