RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 BAP18Q8IXM2 172 aa14.84□□□□□ -0.03
TRIM35-203ENST00000521253 BLNKQ8WV28 456 aa14.84□□□□□ -0.03
TRIM35-203ENST00000521253 PPP1R14DQ9NXH3 145 aa14.84□□□□□ -0.03
TRIM35-203ENST00000521253 RFNGQ9Y644 331 aa14.84□□□□□ -0.03
TRIM35-203ENST00000521253 PDE6HQ13956 83 aa14.83□□□□□ -0.04
TRIM35-203ENST00000521253 OR10J6PQ8NGY7 276 aa14.83□□□□□ -0.04
TRIM35-203ENST00000521253 AQP10Q96PS8 301 aa14.83□□□□□ -0.04
TRIM35-203ENST00000521253 TMEM208Q9BTX3 173 aa14.83□□□□□ -0.04
TRIM35-203ENST00000521253 TIMM9Q9Y5J7 89 aa14.83□□□□□ -0.04
TRIM35-203ENST00000521253 M0R3E3 92 aa14.82□□□□□ -0.04
TRIM35-203ENST00000521253 HBE1P02100 147 aa14.82□□□□□ -0.04
TRIM35-203ENST00000521253 EMP1P54849 157 aa14.82□□□□□ -0.04
TRIM35-203ENST00000521253 Q6ZTC4 211 aa14.82□□□□□ -0.04
TRIM35-203ENST00000521253 OR51M1Q9H341 326 aa14.82□□□□□ -0.04
TRIM35-203ENST00000521253 TMEM189A5PLL7 270 aa14.81□□□□□ -0.04
TRIM35-203ENST00000521253 ZNF767PQ75MW2 155 aa14.81□□□□□ -0.04
TRIM35-203ENST00000521253 FXYD5Q96DB9 178 aa14.81□□□□□ -0.04
TRIM35-203ENST00000521253 MRPL53Q96EL3 112 aaKnown RBP14.81□□□□□ -0.04
TRIM35-203ENST00000521253 PAXXQ9BUH6 204 aa14.81□□□□□ -0.04
TRIM35-203ENST00000521253 HYDINQ4G0P3 5121 aa14.81□□□□□ -0.04
TRIM35-203ENST00000521253 OR10J4P0C629 311 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 NBEAP1P0C6P0 100 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 CDKN1BP46527 198 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 RRN3P1Q2M238 152 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 C12orf74Q32Q52 190 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 EXOC3-AS1Q8N2X6 119 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 OR2T35Q8NGX2 323 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 ZNF503Q96F45 646 aa14.8□□□□□ -0.04
TRIM35-203ENST00000521253 LOC102723971A0A1B0GUV8 181 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 C11orf94C9JXX5 98 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 OR7C2O60412 319 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 PRM2P04554 102 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 ZNF266Q14584 549 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 RPP25LQ8N5L8 163 aaKnown RBP14.79□□□□□ -0.04
TRIM35-203ENST00000521253 RNF141Q8WVD5 230 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 PRELID1Q9Y255 219 aa14.79□□□□□ -0.04
TRIM35-203ENST00000521253 FXYD6-FXYD2A0A087WZ82 144 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 ZNF705GA8MUZ8 300 aaPredicted RBP14.78□□□□□ -0.04
TRIM35-203ENST00000521253 NPIPB6E9PJ23 425 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 SPART-AS1P0CW21 52 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 CT45A10P0DMU9 189 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 ICAM4Q14773 271 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 KIR3DS1Q14943 382 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 C2CD4CQ8TF44 421 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 LINC00476Q8WZB0 136 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 AAMDCQ9H7C9 122 aa14.78□□□□□ -0.04
TRIM35-203ENST00000521253 TRAV10A0A0B4J240 114 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 RNF222A6NCQ9 220 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 G3V3Q6 166 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 EIF3GO75821 320 aaKnown RBP eCLIP14.77□□□□□ -0.05
TRIM35-203ENST00000521253 M6PRP20645 277 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 RAB2AP61019 212 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 ACOT6Q3I5F7 207 aaPredicted RBP14.77□□□□□ -0.05
TRIM35-203ENST00000521253 KHDC3LQ587J8 217 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 HSD17B11Q8NBQ5 300 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 INO80EQ8NBZ0 244 aaPredicted RBP14.77□□□□□ -0.05
TRIM35-203ENST00000521253 PHYHIPLQ96FC7 376 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 DKK2Q9UBU2 259 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 TNFSF18Q9UNG2 199 aa14.77□□□□□ -0.05
TRIM35-203ENST00000521253 YTHDF2Q9Y5A9 579 aaKnown RBP14.77□□□□□ -0.05
TRIM35-203ENST00000521253 TSPOP30536 169 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 TAS2R45P59539 299 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 UBE2L3P68036 154 aaKnown RBP14.76□□□□□ -0.05
TRIM35-203ENST00000521253 FAM222AQ5U5X8 452 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 FAM122CQ6P4D5 195 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 TMEM256Q8N2U0 113 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 ODF3Q96PU9 254 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 LINC01587Q99440 93 aa14.76□□□□□ -0.05
TRIM35-203ENST00000521253 ERCC8Q13216 396 aa14.75□□□□□ -0.05
TRIM35-203ENST00000521253 GFI1BQ5VTD9 330 aa14.75□□□□□ -0.05
TRIM35-203ENST00000521253 IGLL5B9A064 214 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 AZU1P20160 251 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 ATP6V0CP27449 155 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 OR10G4Q8NGN3 311 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 OR10G9Q8NGN4 311 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 OR10G7Q8NGN6 311 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 OR2G3Q8NGZ4 309 aa14.74□□□□□ -0.05
TRIM35-203ENST00000521253 DEFB131BA0A096LNP1 70 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 TEX48A0A1B0GUV7 120 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 A0A1W2PPV4 95 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 J3KRW8 73 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 LY6G6CO95867 125 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 LEPP41159 167 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 TAS2R60P59551 318 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 RANP62826 216 aaKnown RBP14.73□□□□□ -0.05
TRIM35-203ENST00000521253 PSMG3Q9BT73 122 aaPredicted RBP14.73□□□□□ -0.05
TRIM35-203ENST00000521253 AGPAT4-IT1Q9H0P7 198 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 PLA2G2EQ9NZK7 142 aa14.73□□□□□ -0.05
TRIM35-203ENST00000521253 IGKV2-40A0A087WW87 121 aaPredicted RBP14.72□□□□□ -0.05
TRIM35-203ENST00000521253 H7BYZ3 331 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 IGKV2D-40P01614 121 aaPredicted RBP14.72□□□□□ -0.05
TRIM35-203ENST00000521253 HTN1P15515 57 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 RPL7L1Q6DKI1 246 aaKnown RBP14.72□□□□□ -0.05
TRIM35-203ENST00000521253 LINC00477Q96M19 166 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 C20orf144Q9BQM9 153 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 NIPSNAP3BQ9BS92 247 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 SH3BGRL3Q9H299 93 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 Q9H3A6 140 aa14.72□□□□□ -0.05
TRIM35-203ENST00000521253 VPS13DQ5THJ4 4388 aa14.71□□□□□ -0.05
TRIM35-203ENST00000521253 PLAC8L1A1L4L8 177 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms