RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 BATF3Q9NR55 127 aa12.12□□□□□ -0.47
SQLE-205ENST00000521232 OR5AC2Q9NZP5 309 aa12.12□□□□□ -0.47
SQLE-205ENST00000521232 PRAC2D3DTV9 90 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 H2BFSP57053 126 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 DEFA1P59665 94 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 DEFA3P59666 94 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 LINC01587Q99440 93 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 NPCDR1Q9BY65 106 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 ZNF586Q9NXT0 402 aa12.11□□□□□ -0.47
SQLE-205ENST00000521232 LYRM9A8MSI8 78 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 ZNF253O75346 499 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 AZU1P20160 251 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 TAS2R60P59551 318 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 DAD1P61803 113 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 LRRC37A5PQ49AS3 106 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 OR10J6PQ8NGY7 276 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 TMEM14CQ9P0S9 112 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 DNAH17Q9UFH2 4485 aa12.1□□□□□ -0.47
SQLE-205ENST00000521232 PLAC8L1A1L4L8 177 aa12.09□□□□□ -0.47
SQLE-205ENST00000521232 P0DMU3 169 aa12.09□□□□□ -0.47
SQLE-205ENST00000521232 FAM231AP0DMU4 169 aa12.09□□□□□ -0.47
SQLE-205ENST00000521232 FAM231CP0DMU5 169 aa12.09□□□□□ -0.47
SQLE-205ENST00000521232 PPP1R1CQ8WVI7 109 aa12.09□□□□□ -0.47
SQLE-205ENST00000521232 TRBV19A0A075B6N1 114 aa12.08□□□□□ -0.48
SQLE-205ENST00000521232 HIST1H1EP10412 219 aaKnown RBP12.08□□□□□ -0.48
SQLE-205ENST00000521232 GCSAMLQ5JQS6 135 aa12.08□□□□□ -0.48
SQLE-205ENST00000521232 POM121L12Q8N7R1 296 aa12.08□□□□□ -0.48
SQLE-205ENST00000521232 THAP6Q8TBB0 222 aa12.08□□□□□ -0.48
SQLE-205ENST00000521232 C20orf144Q9BQM9 153 aa12.08□□□□□ -0.48
SQLE-205ENST00000521232 FAT2Q9NYQ8 4349 aa12.07□□□□□ -0.48
SQLE-205ENST00000521232 SSNA1O43805 119 aa12.07□□□□□ -0.48
SQLE-205ENST00000521232 PDE6HQ13956 83 aa12.07□□□□□ -0.48
SQLE-205ENST00000521232 KIR3DS1Q14943 382 aa12.07□□□□□ -0.48
SQLE-205ENST00000521232 MRPL53Q96EL3 112 aaKnown RBP12.07□□□□□ -0.48
SQLE-205ENST00000521232 ODF3Q96PU9 254 aa12.07□□□□□ -0.48
SQLE-205ENST00000521232 WDR61Q9GZS3 305 aaKnown RBP12.07□□□□□ -0.48
SQLE-205ENST00000521232 HECTD4Q9Y4D8 3996 aa12.07□□□□□ -0.48
SQLE-205ENST00000521232 NPIPB6E9PJ23 425 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 H7BYZ3 331 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 NDUFB4O95168 129 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 MPC2O95563 127 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 CT45A10P0DMU9 189 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 HTN3P15516 51 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 CLINT1Q14677 625 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 C16orf74Q96GX8 76 aa12.06□□□□□ -0.48
SQLE-205ENST00000521232 PARD6GQ9BYG4 376 aaPredicted RBP12.06□□□□□ -0.48
SQLE-205ENST00000521232 PYYP10082 97 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 HTN1P15515 57 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 FCN2Q15485 313 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 GFI1BQ5VTD9 330 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 ZNF493Q6ZR52 646 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 FAM167A-AS1Q96KT0 104 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 SLC25A2Q9BXI2 301 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 PRELID1Q9Y255 219 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 TIMM9Q9Y5J7 89 aa12.05□□□□□ -0.48
SQLE-205ENST00000521232 M0R3E3 92 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 PET100P0DJ07 73 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 DEFB130BP0DP73 79 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 DEFB130AP0DP74 79 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 TMEM88Q6PEY1 159 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 MIR17HGQ75NE6 70 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 RNASE8Q8TDE3 154 aaKnown RBP12.04□□□□□ -0.48
SQLE-205ENST00000521232 TMEM263Q8WUH6 116 aaKnown RBP12.04□□□□□ -0.48
SQLE-205ENST00000521232 KCNIP2Q9NS61 270 aa12.04□□□□□ -0.48
SQLE-205ENST00000521232 TIMM8BQ9Y5J9 83 aaPredicted RBP12.04□□□□□ -0.48
SQLE-205ENST00000521232 C17orf112F2Z3M2 114 aa12.03□□□□□ -0.48
SQLE-205ENST00000521232 LEPP41159 167 aa12.03□□□□□ -0.48
SQLE-205ENST00000521232 BLNKQ8WV28 456 aa12.03□□□□□ -0.48
SQLE-205ENST00000521232 LINC00477Q96M19 166 aa12.03□□□□□ -0.48
SQLE-205ENST00000521232 ATP5SQ99766 215 aa12.03□□□□□ -0.48
SQLE-205ENST00000521232 MRPL32Q9BYC8 188 aaKnown RBP12.03□□□□□ -0.48
SQLE-205ENST00000521232 HSPB11Q9Y547 144 aa12.03□□□□□ -0.48
SQLE-205ENST00000521232 CBY3A6NI87 242 aa12.02□□□□□ -0.49
SQLE-205ENST00000521232 NBEAP1P0C6P0 100 aa12.02□□□□□ -0.49
SQLE-205ENST00000521232 RPL12P30050 165 aaKnown RBP12.02□□□□□ -0.49
SQLE-205ENST00000521232 EXOC3-AS1Q8N2X6 119 aa12.02□□□□□ -0.49
SQLE-205ENST00000521232 OR51M1Q9H341 326 aa12.02□□□□□ -0.49
SQLE-205ENST00000521232 FUT9Q9Y231 359 aa12.02□□□□□ -0.49
SQLE-205ENST00000521232 ERCC8Q13216 396 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 RNF212Q495C1 297 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 CCDC28AQ8IWP9 274 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 C15orf53Q8NAA6 179 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 FAM19A4Q96LR4 140 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 AGPAT4-IT1Q9H0P7 198 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 AAMDCQ9H7C9 122 aa12.01□□□□□ -0.49
SQLE-205ENST00000521232 NOP10Q9NPE3 64 aaKnown RBP12.01□□□□□ -0.49
SQLE-205ENST00000521232 TRAV12-3A0A0B4J271 114 aa12□□□□□ -0.49
SQLE-205ENST00000521232 J3KRW8 73 aa12□□□□□ -0.49
SQLE-205ENST00000521232 SLC25A5P05141 298 aaKnown RBP12□□□□□ -0.49
SQLE-205ENST00000521232 ATP5G1P05496 136 aa12□□□□□ -0.49
SQLE-205ENST00000521232 ATP5G3P48201 142 aa12□□□□□ -0.49
SQLE-205ENST00000521232 ICAM4Q14773 271 aa12□□□□□ -0.49
SQLE-205ENST00000521232 C9orf47Q6ZRZ4 202 aa12□□□□□ -0.49
SQLE-205ENST00000521232 FXYD5Q96DB9 178 aa12□□□□□ -0.49
SQLE-205ENST00000521232 PYGO2Q9BRQ0 406 aa12□□□□□ -0.49
SQLE-205ENST00000521232 PAXXQ9BUH6 204 aa12□□□□□ -0.49
SQLE-205ENST00000521232 MBD2Q9UBB5 411 aa12□□□□□ -0.49
SQLE-205ENST00000521232 KLLNB2CW77 178 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 IFNA5P01569 189 aa11.99□□□□□ -0.49
SQLE-205ENST00000521232 UBE2DNLQ8IWF7 75 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms