RNA–Protein interactions for RNA: ENST00000518882.2

PCDHGA11-202, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDHGA11, Length 2,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-202ENST00000518882 TMEM190Q8WZ59 177 aa12.96□□□□□ -0.34
PCDHGA11-202ENST00000518882 AAMDCQ9H7C9 122 aa12.96□□□□□ -0.34
PCDHGA11-202ENST00000518882 U3KQK5 164 aa12.96□□□□□ -0.34
PCDHGA11-202ENST00000518882 IGLV11-55A0A075B6I3 123 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 IGHV3-23P01764 117 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 GRNP28799 593 aaKnown RBP12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 PDE6HQ13956 83 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 AMMECR1LQ6DCA0 310 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 NPBQ8NG41 125 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 PRELID3AQ96N28 172 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 DPM3Q9P2X0 92 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 NDPQ00604 133 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 RAB1BQ9H0U4 201 aa12.95□□□□□ -0.34
PCDHGA11-202ENST00000518882 CEP295Q9C0D2 2601 aa12.94□□□□□ -0.34
PCDHGA11-202ENST00000518882 FGF6P10767 208 aa12.94□□□□□ -0.34
PCDHGA11-202ENST00000518882 HES1Q14469 280 aa12.94□□□□□ -0.34
PCDHGA11-202ENST00000518882 MRPL51Q4U2R6 128 aaKnown RBP12.94□□□□□ -0.34
PCDHGA11-202ENST00000518882 ASH1LQ9NR48 2969 aaKnown RBP12.94□□□□□ -0.34
PCDHGA11-202ENST00000518882 SMKR1H3BMG3 65 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 CD5LO43866 347 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 EGR2P11161 476 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 C5orf64Q2M2E5 130 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 IGFL4Q6B9Z1 124 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 OR11H6Q8NGC7 330 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 Q8TAT8 98 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 ZNF80P51504 273 aaPredicted RBP12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 MFAP4P55083 255 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 TCTAP57738 103 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 PSG9Q00887 426 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 PAX8Q06710 450 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 ZNF575Q86XF7 245 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 ORMDL3Q8N138 153 aa12.93□□□□□ -0.34
PCDHGA11-202ENST00000518882 CDKN1BP46527 198 aa12.92□□□□□ -0.34
PCDHGA11-202ENST00000518882 PRR25Q96S07 402 aa12.92□□□□□ -0.34
PCDHGA11-202ENST00000518882 HLA-DMBP28068 263 aa12.92□□□□□ -0.34
PCDHGA11-202ENST00000518882 NPIPB5A8MRT5 1133 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 IGHG4P01861 327 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 CACNG7P62955 275 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 VGLL1Q99990 258 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 SMAD5-AS1Q9Y6J3 95 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 WNK2Q9Y3S1 2297 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 NPYP01303 97 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 COX8CQ7Z4L0 72 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 DYNAPQ8N1N2 210 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 ARPC1AQ92747 370 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 ZNF48Q96MX3 618 aaPredicted RBP12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 C21orf62Q9NYP8 219 aa12.91□□□□□ -0.34
PCDHGA11-202ENST00000518882 IGHV3OR16-8A0A075B7F1 116 aa12.9□□□□□ -0.34
PCDHGA11-202ENST00000518882 FAM90A27PA6NNH2 459 aa12.9□□□□□ -0.34
PCDHGA11-202ENST00000518882 ODF3BA8MYP8 253 aa12.9□□□□□ -0.34
PCDHGA11-202ENST00000518882 NHLH1Q02575 133 aa12.9□□□□□ -0.34
PCDHGA11-202ENST00000518882 VKORC1Q9BQB6 163 aa12.9□□□□□ -0.34
PCDHGA11-202ENST00000518882 C7orf71A4D174 169 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 TCF15Q12870 199 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 TWIST1Q15672 202 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 RNF151Q2KHN1 245 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 LGALS9BQ3B8N2 356 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 TMEM97Q5BJF2 176 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 LGALS9CQ6DKI2 356 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 ZNF562Q6V9R5 426 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 RABAC1Q9UI14 185 aa12.9□□□□□ -0.35
PCDHGA11-202ENST00000518882 CEACAM3P40198 252 aa12.89□□□□□ -0.35
PCDHGA11-202ENST00000518882 TTC9CQ8N5M4 171 aa12.89□□□□□ -0.35
PCDHGA11-202ENST00000518882 CST9LQ9H4G1 147 aa12.89□□□□□ -0.35
PCDHGA11-202ENST00000518882 NCBP2LA6PVI3 153 aaKnown RBP12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 HBDP02042 147 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 CTSGP08311 255 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 UQCRFS1P47985 274 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 SAPCD1Q5SSQ6 148 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 S100A7AQ86SG5 101 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 FER1L6-AS1Q8NA97 138 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 DPF1Q92782 380 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 PSMG3-AS1Q96PY0 264 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 IGHV3-35A0A0C4DH35 117 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 GAS8-AS1O95177 125 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 IGLC6P0CF74 106 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 RPL7P18124 248 aaKnown RBP12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 CKS2P33552 79 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
PCDHGA11-202ENST00000518882 PTPRQQ9UMZ3 2332 aa12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 RPS20P60866 119 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 BOD1L2Q8IYS8 172 aa12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 PEF1Q9UBV8 284 aaKnown RBP12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 NBASA2RRP1 2371 aa12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 IFI27L1Q96BM0 104 aa12.87□□□□□ -0.35
PCDHGA11-202ENST00000518882 SPTA1P02549 2419 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 CACNA1BQ00975 2339 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 OR1N2Q8NGR9 330 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 M0R1W7 72 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 PRTN3P24158 256 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 SEC11AP67812 179 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 CDSNQ15517 529 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 OCIAD2Q56VL3 154 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 RNF185Q96GF1 192 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 THYN1Q9P016 225 aa12.86□□□□□ -0.35
PCDHGA11-202ENST00000518882 NDUFS7O75251 213 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 135.1 ms