RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 FBN2P35556 2912 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 ARHGAP32A7KAX9 2087 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 IGHV4-61A0A0C4DH41 118 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 A0A1B0GUT8 65 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 SERTM2A0A1B0GWG4 89 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 FBLL1A6NHQ2 334 aaKnown RBP14.41□□□□□ -0.1
SDC2-202ENST00000518385 SSBP2P81877 361 aaPredicted RBP14.41□□□□□ -0.1
SDC2-202ENST00000518385 DEFB113Q30KQ7 82 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 LHFPL4Q7Z7J7 247 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 LRRC75A-AS1Q8N1F1 130 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 PGLYRP4Q96LB8 373 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 CLEC5AQ9NY25 188 aa14.41□□□□□ -0.1
SDC2-202ENST00000518385 TAX1BP3O14907 124 aa14.4□□□□□ -0.1
SDC2-202ENST00000518385 APOHP02749 345 aaPredicted RBP14.4□□□□□ -0.1
SDC2-202ENST00000518385 ORM2P19652 201 aa14.4□□□□□ -0.1
SDC2-202ENST00000518385 RNASE8Q8TDE3 154 aaKnown RBP14.4□□□□□ -0.1
SDC2-202ENST00000518385 PEF1Q9UBV8 284 aaKnown RBP14.4□□□□□ -0.1
SDC2-202ENST00000518385 PTPN13Q12923 2485 aa14.4□□□□□ -0.1
SDC2-202ENST00000518385 TACC2O95359 2948 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 CNIH1O95406 144 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 COX8AP10176 69 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 C5orf64Q2M2E5 130 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 Q8N6K4 173 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 BLNKQ8WV28 456 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 SLC25A16P16260 332 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 MPV17L2Q567V2 206 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 SMIM15Q7Z3B0 74 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 OR10AG1Q8NH19 301 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 NPFFR1Q9GZQ6 430 aa14.39□□□□□ -0.11
SDC2-202ENST00000518385 CELSR2Q9HCU4 2923 aa14.38□□□□□ -0.11
SDC2-202ENST00000518385 NUDT3O95989 172 aa14.38□□□□□ -0.11
SDC2-202ENST00000518385 HES1Q14469 280 aa14.38□□□□□ -0.11
SDC2-202ENST00000518385 ZNF562Q6V9R5 426 aa14.38□□□□□ -0.11
SDC2-202ENST00000518385 ZNF493Q6ZR52 646 aa14.38□□□□□ -0.11
SDC2-202ENST00000518385 AP5S1Q9NUS5 200 aa14.38□□□□□ -0.11
SDC2-202ENST00000518385 SIVA1O15304 175 aa14.37□□□□□ -0.11
SDC2-202ENST00000518385 FAM106CPP0CH98 169 aa14.37□□□□□ -0.11
SDC2-202ENST00000518385 GPR183P32249 361 aa14.36□□□□□ -0.11
SDC2-202ENST00000518385 PAX8Q06710 450 aa14.36□□□□□ -0.11
SDC2-202ENST00000518385 LINC00322Q6ZN03 302 aaPredicted RBP14.36□□□□□ -0.11
SDC2-202ENST00000518385 FA2HQ7L5A8 372 aa14.36□□□□□ -0.11
SDC2-202ENST00000518385 MRPL36Q9P0J6 103 aaKnown RBP14.36□□□□□ -0.11
SDC2-202ENST00000518385 LINC01559Q495D7 138 aa14.35□□□□□ -0.11
SDC2-202ENST00000518385 BPIFA4PQ86YQ2 179 aa14.35□□□□□ -0.11
SDC2-202ENST00000518385 CIARTQ8N365 385 aaPredicted RBP14.35□□□□□ -0.11
SDC2-202ENST00000518385 MED13LQ71F56 2210 aa14.35□□□□□ -0.11
SDC2-202ENST00000518385 K7ERU9 68 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 PDE6HQ13956 83 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 ZNF747Q9BV97 191 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 CENPEQ02224 2701 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 A0A096LNT2 108 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 A0A1W2PRD5 423 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 A0A1W2PRF3 423 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 A0A1W2PRM7 423 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 A6NDN8 102 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 NPIPB5A8MRT5 1133 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 IGLV2-11P01706 119 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 TMEM11P17152 192 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 LGALS9BQ3B8N2 356 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 LGALS9CQ6DKI2 356 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 PRSS57Q6UWY2 283 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 DYNAPQ8N1N2 210 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 OR9G4Q8NGQ1 327 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 SLC25A39Q9BZJ4 359 aaPredicted RBP14.34□□□□□ -0.11
SDC2-202ENST00000518385 RPH3ALQ9UNE2 315 aa14.34□□□□□ -0.11
SDC2-202ENST00000518385 ANKRD17O75179 2603 aaKnown RBP14.33□□□□□ -0.12
SDC2-202ENST00000518385 hDV102S1A0JD36 115 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 SH2D7A6NKC9 451 aaPredicted RBP14.33□□□□□ -0.12
SDC2-202ENST00000518385 I3L2K1 104 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 NPFFO15130 113 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 IGLC1P0CG04 106 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 COX8CQ7Z4L0 72 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 CST9LQ9H4G1 147 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 U3KQK5 164 aa14.33□□□□□ -0.12
SDC2-202ENST00000518385 GTF2H5Q6ZYL4 71 aa14.32□□□□□ -0.12
SDC2-202ENST00000518385 ARPC1AQ92747 370 aa14.32□□□□□ -0.12
SDC2-202ENST00000518385 AJUBAQ96IF1 538 aa14.32□□□□□ -0.12
SDC2-202ENST00000518385 RASL11BQ9BPW5 248 aa14.32□□□□□ -0.12
SDC2-202ENST00000518385 SHANK2-AS3Q9BTD1 123 aa14.32□□□□□ -0.12
SDC2-202ENST00000518385 TMUB1Q9BVT8 246 aa14.32□□□□□ -0.12
SDC2-202ENST00000518385 TRBV19A0A075B6N1 114 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 S100A7P31151 101 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 SAA4P35542 130 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 OCIAD2Q56VL3 154 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 TTC9CQ8N5M4 171 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 PRSS3P2Q8NHM4 247 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 GCN1Q92616 2671 aaKnown RBP14.31□□□□□ -0.12
SDC2-202ENST00000518385 POLQO75417 2590 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 ABCA12Q86UK0 2595 aa14.31□□□□□ -0.12
SDC2-202ENST00000518385 MUC21A0A0G2JKD1 596 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 MUC21A0A140T8X8 626 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 NCBP2LA6PVI3 153 aaKnown RBP14.3□□□□□ -0.12
SDC2-202ENST00000518385 H3BRM9 83 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 H3BRN7 92 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 CT45A10P0DMU9 189 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 LOXL1Q08397 574 aaPredicted RBP14.3□□□□□ -0.12
SDC2-202ENST00000518385 PSG3Q16557 428 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 Q5PR19 223 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 MUC21Q5SSG8 566 aa14.3□□□□□ -0.12
SDC2-202ENST00000518385 PRNTQ86SH4 94 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms