RNA–Protein interactions for RNA: ENST00000512070.6

TRIO-218, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 8,907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-218ENST00000512070 DSCAMO60469 2012 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 C9orf118A6NHY6 69 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 IGHG4P01861 327 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 FOXF2Q12947 444 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 TRBV25-1A0A075B6N4 114 aa11.82□□□□□ -0.52
TRIO-218ENST00000512070 SHANK2-AS3Q9BTD1 123 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 ANKHD1Q8IWZ3 2542 aaKnown RBP11.81□□□□□ -0.52
TRIO-218ENST00000512070 A0A0U1RRA0 63 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 ZNF561-AS1K7EIQ3 104 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 hDV102S1A0JD36 115 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 SLAQ13239 276 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 ZNF329Q86UD4 541 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 TGFBR3LH3BV60 316 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 C14orf178Q8N769 122 aaPredicted RBP11.81□□□□□ -0.52
TRIO-218ENST00000512070 TRACP01848 142 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 ZNF672Q499Z4 452 aaPredicted RBP11.81□□□□□ -0.52
TRIO-218ENST00000512070 NKAPP1Q8N9T2 125 aa11.81□□□□□ -0.52
TRIO-218ENST00000512070 PFN1P07737 140 aaKnown RBP11.8□□□□□ -0.52
TRIO-218ENST00000512070 SIVA1O15304 175 aa11.8□□□□□ -0.52
TRIO-218ENST00000512070 HLA-DMBP28068 263 aa11.8□□□□□ -0.52
TRIO-218ENST00000512070 HGFACQ04756 655 aa11.8□□□□□ -0.52
TRIO-218ENST00000512070 REG4Q9BYZ8 158 aa11.8□□□□□ -0.52
TRIO-218ENST00000512070 CEP192Q8TEP8 1941 aa11.8□□□□□ -0.52
TRIO-218ENST00000512070 ZFP36L1Q07352 338 aaKnown RBP11.8□□□□□ -0.52
TRIO-218ENST00000512070 ZCCHC24Q8N2G6 241 aaKnown RBP11.79□□□□□ -0.52
TRIO-218ENST00000512070 NABP1Q96AH0 204 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 A6NNC1 897 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 YPEL3P61236 119 aaPredicted RBP11.79□□□□□ -0.52
TRIO-218ENST00000512070 PYY3Q5JQD4 70 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 ADAMTS9Q9P2N4 1935 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 TMEM126AQ9H061 195 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 IGKV1-5P01602 117 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 GGNQ86UU5 652 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 SPXQ9BT56 116 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 SPRR3Q9UBC9 169 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 RSPO4Q2I0M5 234 aaPredicted RBP11.79□□□□□ -0.52
TRIO-218ENST00000512070 TMEM14BQ9NUH8 114 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 CACNA1AO00555 2505 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 C2orf16Q68DN1 1984 aa11.79□□□□□ -0.52
TRIO-218ENST00000512070 ZNF474Q6S9Z5 364 aaPredicted RBP11.78□□□□□ -0.52
TRIO-218ENST00000512070 Q8N8P6 123 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 LYPD3O95274 346 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 SLC25A16P16260 332 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 ACYP1P07311 99 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 FAM231DQ6ZW35 169 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 PIP4P2Q8N4L2 257 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 FCN3O75636 299 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 GFI1Q99684 422 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 VSIRQ9H7M9 311 aa11.78□□□□□ -0.52
TRIO-218ENST00000512070 CDKN1AP38936 164 aa11.77□□□□□ -0.53
TRIO-218ENST00000512070 NPC2P61916 151 aa11.77□□□□□ -0.53
TRIO-218ENST00000512070 C15orf62A8K5M9 175 aa11.77□□□□□ -0.53
TRIO-218ENST00000512070 PRO1854Q9UHT4 67 aa11.77□□□□□ -0.53
TRIO-218ENST00000512070 STPG4Q8N801 248 aa11.77□□□□□ -0.53
TRIO-218ENST00000512070 FAM104BQ5XKR9 115 aa11.77□□□□□ -0.53
TRIO-218ENST00000512070 NAV3Q8IVL0 2385 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 AGRNO00468 2067 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 LGALS9BQ3B8N2 356 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 LGALS9CQ6DKI2 356 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 AMN1Q8IY45 258 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 PRRC2AP48634 2157 aaKnown RBP11.76□□□□□ -0.53
TRIO-218ENST00000512070 KIAA1549LQ6ZVL6 1849 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 LHBP01229 141 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 TMEM14CQ9P0S9 112 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 CD33P20138 364 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 KIAA1671Q9BY89 1806 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 LINC01356Q8N9X3 169 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 IGHG3P01860 377 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 COX8AP10176 69 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 HERVK_113P63121 156 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 ZNF664Q8N3J9 261 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 ALPK3Q96L96 1907 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 RNASE2P10153 161 aaKnown RBP11.76□□□□□ -0.53
TRIO-218ENST00000512070 NTF4P34130 210 aa11.76□□□□□ -0.53
TRIO-218ENST00000512070 GAS1P54826 345 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 IGKV1-12A0A0C4DH73 117 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 IGKV1D-12P01611 117 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 RHPN1-AS1Q9BWJ2 59 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 KLHL30-AS1Q8NEE0 82 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 TANC1Q9C0D5 1861 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 Q6P435 159 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 F8VRH5 84 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 APOC4P55056 127 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 TP53TG1Q9Y2A0 90 aa11.75□□□□□ -0.53
TRIO-218ENST00000512070 THAP8Q8NA92 274 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 NTN3O00634 580 aaPredicted RBP11.74□□□□□ -0.53
TRIO-218ENST00000512070 TCTEX1D4Q5JR98 221 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 QRFPP83859 136 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 FLVCR1-AS1Q8TAF5 88 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 H3BUX3 64 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 BVES-AS1Q5T3Y7 98 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 PYGO2Q9BRQ0 406 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 IGKV1-27A0A075B6S5 117 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 EGR2P11161 476 aaPredicted RBP11.74□□□□□ -0.53
TRIO-218ENST00000512070 C18orf32Q8TCD1 76 aa11.74□□□□□ -0.53
TRIO-218ENST00000512070 CD24P25063 80 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms