RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 BOLA2-SMG1P6H3BVE0 249 aa13.03□□□□□ -0.32
CLDND1-220ENST00000508902 ZNF253O75346 499 aa13.03□□□□□ -0.32
CLDND1-220ENST00000508902 EXOC3-AS1Q8N2X6 119 aa13.03□□□□□ -0.32
CLDND1-220ENST00000508902 PHYHIPLQ96FC7 376 aa13.03□□□□□ -0.32
CLDND1-220ENST00000508902 TNFSF18Q9UNG2 199 aa13.03□□□□□ -0.32
CLDND1-220ENST00000508902 IFNA5P01569 189 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 OR10J4P0C629 311 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 RAB2AP61019 212 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 GUK1Q16774 197 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 ZNF767PQ75MW2 155 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 OR2T35Q8NGX2 323 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 MRPL32Q9BYC8 188 aaKnown RBP13.02□□□□□ -0.33
CLDND1-220ENST00000508902 KCNIP2Q9NS61 270 aa13.02□□□□□ -0.33
CLDND1-220ENST00000508902 C17orf112F2Z3M2 114 aa13.01□□□□□ -0.33
CLDND1-220ENST00000508902 C12orf74Q32Q52 190 aa13.01□□□□□ -0.33
CLDND1-220ENST00000508902 Q6ZTC4 211 aa13.01□□□□□ -0.33
CLDND1-220ENST00000508902 ASB13Q8WXK3 278 aa13.01□□□□□ -0.33
CLDND1-220ENST00000508902 FXYD6-FXYD2A0A087WZ82 144 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 NUPR2A6NF83 97 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 NPIPB6E9PJ23 425 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 CT45A10P0DMU9 189 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 PDE6HQ13956 83 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 HSD17B11Q8NBQ5 300 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 SCGB1C1Q8TD33 95 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 PAXXQ9BUH6 204 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 SH3BGRL3Q9H299 93 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 OR51M1Q9H341 326 aa13□□□□□ -0.33
CLDND1-220ENST00000508902 PLAC8L1A1L4L8 177 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 ZNF705GA8MUZ8 300 aaPredicted RBP12.99□□□□□ -0.33
CLDND1-220ENST00000508902 NBEAP1P0C6P0 100 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 ATP6V0CP27449 155 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 RHOBP62745 196 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 ERCC8Q13216 396 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 RPL7L1Q6DKI1 246 aaKnown RBP12.99□□□□□ -0.33
CLDND1-220ENST00000508902 MRPL53Q96EL3 112 aaKnown RBP12.99□□□□□ -0.33
CLDND1-220ENST00000508902 PLA2G2EQ9NZK7 142 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 GOLT1BQ9Y3E0 138 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 TIMM9Q9Y5J7 89 aa12.99□□□□□ -0.33
CLDND1-220ENST00000508902 DNAH10Q8IVF4 4471 aa12.98□□□□□ -0.33
CLDND1-220ENST00000508902 INSP01308 110 aa12.98□□□□□ -0.33
CLDND1-220ENST00000508902 AZU1P20160 251 aa12.98□□□□□ -0.33
CLDND1-220ENST00000508902 RPP25LQ8N5L8 163 aaKnown RBP12.98□□□□□ -0.33
CLDND1-220ENST00000508902 RNF141Q8WVD5 230 aa12.98□□□□□ -0.33
CLDND1-220ENST00000508902 IGKV2-40A0A087WW87 121 aaPredicted RBP12.97□□□□□ -0.33
CLDND1-220ENST00000508902 LOC102723971A0A1B0GUV8 181 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 SMIM9A6NGZ8 99 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 IGKV2D-40P01614 121 aaPredicted RBP12.97□□□□□ -0.33
CLDND1-220ENST00000508902 AMBPP02760 352 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 EMP1P54849 157 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 ICAM4Q14773 271 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 GFI1BQ5VTD9 330 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 SSX7Q7RTT5 188 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 OR11H4Q8NGC9 324 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 OR2G3Q8NGZ4 309 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 FAM19A4Q96LR4 140 aa12.97□□□□□ -0.33
CLDND1-220ENST00000508902 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.33
CLDND1-220ENST00000508902 OR7C2O60412 319 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 M6PRP20645 277 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 CDKN1BP46527 198 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 FAM122CQ6P4D5 195 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 LINC00476Q8WZB0 136 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 AGPAT4-IT1Q9H0P7 198 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 CYTL1Q9NRR1 136 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 DKK2Q9UBU2 259 aa12.96□□□□□ -0.33
CLDND1-220ENST00000508902 HBE1P02100 147 aa12.95□□□□□ -0.34
CLDND1-220ENST00000508902 UBE2L3P68036 154 aaKnown RBP12.95□□□□□ -0.34
CLDND1-220ENST00000508902 ZNF266Q14584 549 aa12.95□□□□□ -0.34
CLDND1-220ENST00000508902 PRR9Q5T870 116 aa12.95□□□□□ -0.34
CLDND1-220ENST00000508902 FAM222AQ5U5X8 452 aa12.95□□□□□ -0.34
CLDND1-220ENST00000508902 OR10J6PQ8NGY7 276 aa12.95□□□□□ -0.34
CLDND1-220ENST00000508902 VGLL1Q99990 258 aa12.95□□□□□ -0.34
CLDND1-220ENST00000508902 PSMG3Q9BT73 122 aaPredicted RBP12.95□□□□□ -0.34
CLDND1-220ENST00000508902 YTHDF2Q9Y5A9 579 aaKnown RBP12.95□□□□□ -0.34
CLDND1-220ENST00000508902 EPPK1P58107 5090 aaKnown RBP12.95□□□□□ -0.34
CLDND1-220ENST00000508902 RRN3P1Q2M238 152 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 ACOT6Q3I5F7 207 aaPredicted RBP12.94□□□□□ -0.34
CLDND1-220ENST00000508902 Q6ZQT7 251 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 OR10G4Q8NGN3 311 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 OR10G9Q8NGN4 311 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 OR10G7Q8NGN6 311 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 ODF3Q96PU9 254 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 PRELID1Q9Y255 219 aa12.94□□□□□ -0.34
CLDND1-220ENST00000508902 J3KRW8 73 aa12.93□□□□□ -0.34
CLDND1-220ENST00000508902 ARPC5O15511 151 aa12.93□□□□□ -0.34
CLDND1-220ENST00000508902 KHDC3LQ587J8 217 aa12.93□□□□□ -0.34
CLDND1-220ENST00000508902 Q9H3A6 140 aa12.93□□□□□ -0.34
CLDND1-220ENST00000508902 RANP62826 216 aaKnown RBP12.92□□□□□ -0.34
CLDND1-220ENST00000508902 ZNF726P1Q15940 193 aa12.92□□□□□ -0.34
CLDND1-220ENST00000508902 C9orf47Q6ZRZ4 202 aa12.92□□□□□ -0.34
CLDND1-220ENST00000508902 ZFAND2AQ8N6M9 145 aa12.92□□□□□ -0.34
CLDND1-220ENST00000508902 INO80EQ8NBZ0 244 aaPredicted RBP12.92□□□□□ -0.34
CLDND1-220ENST00000508902 TMEM208Q9BTX3 173 aa12.92□□□□□ -0.34
CLDND1-220ENST00000508902 APLNQ9ULZ1 77 aa12.92□□□□□ -0.34
CLDND1-220ENST00000508902 TMEM189A5PLL7 270 aa12.91□□□□□ -0.34
CLDND1-220ENST00000508902 KLLNB2CW77 178 aa12.91□□□□□ -0.34
CLDND1-220ENST00000508902 STAG3L2P0CL84 134 aa12.91□□□□□ -0.34
CLDND1-220ENST00000508902 STAG3L3P0CL85 134 aa12.91□□□□□ -0.34
CLDND1-220ENST00000508902 ARL14EPLP0DKL9 152 aa12.91□□□□□ -0.34
CLDND1-220ENST00000508902 TSPOP30536 169 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms