RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
SH3RF1-203ENST00000508685 ITPR2Q14571 2701 aa8.66□□□□□ -1.02
SH3RF1-203ENST00000508685 TRBV19A0A075B6N1 114 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 A0A1B0GUT8 65 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 FBLL1A6NHQ2 334 aaKnown RBP8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 NCBP2LA6PVI3 153 aaKnown RBP8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 GOSR1O95249 250 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 IGLV2-11P01706 119 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 IGLL1P15814 213 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 UBE2E1P51965 193 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 MINOS1Q5TGZ0 78 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 C10orf105Q8TEF2 133 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 URB1-AS1Q96HZ7 61 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 SGK494Q96LW2 274 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 PIMREGQ9BSJ6 248 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 MS4A6AQ9H2W1 248 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 CBY1Q9Y3M2 126 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 MINOS1-NBL1R4GNA1 71 aa8.65□□□□□ -1.02
SH3RF1-203ENST00000508685 IGHV4-30-2A0A087WSY4 118 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 IGHV1-24A0A0C4DH33 117 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 OR4C46A6NHA9 309 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 H3BRN7 92 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 PDE6HQ13956 83 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 C5orf64Q2M2E5 130 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 GOLT1AQ6ZVE7 132 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 PRNTQ86SH4 94 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 PIP4P2Q8N4L2 257 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF738Q8NE65 137 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF48Q96MX3 618 aaPredicted RBP8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 APOHP02749 345 aaPredicted RBP8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 S100A7P31151 101 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 NDPQ00604 133 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 FAM120AOSQ5T036 256 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 CLEC2AQ6UVW9 174 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 ATOH7Q8N100 152 aa8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 GSX1Q9H4S2 264 aaPredicted RBP8.64□□□□□ -1.03
SH3RF1-203ENST00000508685 NAV2Q8IVL1 2488 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 IGHV3OR16-10A0A075B7F0 116 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 OOSP1A8MZH6 123 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 SCGB2A1O75556 95 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 IGKV1-17P01599 117 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 TFPI2P48307 235 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 LEMD1Q68G75 181 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 CIARTQ8N365 385 aaPredicted RBP8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 Q8N6K4 173 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 MAST4O15021 2626 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 CENPVL3A0A0U1RRI6 287 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 NDUFB8O95169 186 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 TMEM11P17152 192 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 PSG3Q16557 428 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 KLF17Q5JT82 389 aaPredicted RBP8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 ASPHD1Q5U4P2 390 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 PMCHL2Q9BQD1 86 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 AAMDCQ9H7C9 122 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 PSG8Q9UQ74 426 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 COX11Q9Y6N1 276 aa8.63□□□□□ -1.03
SH3RF1-203ENST00000508685 WI2-2373I1.2A0A1W2PRP0 233 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 SH2D7A6NKC9 451 aaPredicted RBP8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 K7EIM0 57 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 CT45A10P0DMU9 189 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 CSN1S1P47710 185 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 PSG9Q00887 426 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 RELQ04864 619 aaPredicted RBP8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 EBI3Q14213 229 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 C12orf54Q6X4T0 127 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 SIGLEC15Q6ZMC9 328 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 SPATA12Q7Z6I5 190 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 EXOC3-AS1Q8N2X6 119 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 RNF125Q96EQ8 232 aa8.62□□□□□ -1.03
SH3RF1-203ENST00000508685 NDUFS8O00217 210 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 NPFFO15130 113 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 HLA-DRB1P01911 266 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 HINT1P49773 126 aaPredicted RBP8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 MAJINQ3KP22 176 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 SLC25A34Q6PIV7 304 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF493Q6ZR52 646 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF491Q8N8L2 437 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 CLEC5AQ9NY25 188 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF469Q96JG9 3925 aaPredicted RBP8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 APCP25054 2843 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 CYSRT1A8MQ03 144 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 NPIPB5A8MRT5 1133 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 H3BTX0 84 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 FAM106CPP0CH98 169 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 PTTG1IPP53801 180 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 MFAP4P55083 255 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 PAX8Q06710 450 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 UBE2V1Q13404 147 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 SAPCD1Q5SSQ6 148 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF562Q6V9R5 426 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 BRD3OSQ6XYD6 125 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 COX8CQ7Z4L0 72 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ARPC1AQ92747 370 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ZC2HC1AQ96GY0 325 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 ZNF414Q96IQ9 312 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 AP5S1Q9NUS5 200 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 S4R3C0 116 aa8.61□□□□□ -1.03
SH3RF1-203ENST00000508685 TRAV8-1A0A0A6YYK1 113 aa8.6□□□□□ -1.03
SH3RF1-203ENST00000508685 TRAV40A0A0B4J280 105 aa8.6□□□□□ -1.03
SH3RF1-203ENST00000508685 MRPS12O15235 138 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms