RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 SMIM9A6NGZ8 99 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 AMBPP02760 352 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 GALR1P47211 349 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 MEOX2P50222 304 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 SLC25A39Q9BZJ4 359 aaPredicted RBP11.57□□□□□ -0.56
LMNA-222ENST00000508500 KCNIP2Q9NS61 270 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
LMNA-222ENST00000508500 SMCO3A2RU48 225 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 C17orf112F2Z3M2 114 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 SULT1A2P50226 295 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 EMP1P54849 157 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 PLP1P60201 277 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 EBLN2Q6P2I7 272 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 PATE2Q6UY27 113 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 RNF182Q8N6D2 247 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 SAT2Q96F10 170 aaPredicted RBP11.56□□□□□ -0.56
LMNA-222ENST00000508500 SHANK2-AS3Q9BTD1 123 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 DKK2Q9UBU2 259 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 WDR83OSQ9Y284 106 aa11.56□□□□□ -0.56
LMNA-222ENST00000508500 KIAA1109Q2LD37 5005 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 CRXO43186 299 aaPredicted RBP11.55□□□□□ -0.56
LMNA-222ENST00000508500 SPART-AS1P0CW21 52 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 ATP6V0CP27449 155 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 RAB31Q13636 194 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 DPPA3Q6W0C5 159 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 OR2G3Q8NGZ4 309 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 GPR82Q96P67 336 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 UHRF2Q96PU4 802 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 RFNGQ9Y644 331 aa11.55□□□□□ -0.56
LMNA-222ENST00000508500 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
LMNA-222ENST00000508500 PRM2P04554 102 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 LINC00869P0C866 280 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 CNN1P51911 297 aaKnown RBP11.54□□□□□ -0.56
LMNA-222ENST00000508500 BLOC1S1P78537 153 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 FAM222AQ5U5X8 452 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 SAMD13Q5VXD3 122 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 HSD17B11Q8NBQ5 300 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 TMED6Q8WW62 240 aa11.54□□□□□ -0.56
LMNA-222ENST00000508500 UBE2L5PA0A1B0GUS4 154 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 TMEM189A5PLL7 270 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 MBP02144 154 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 PRB4P10163 310 aaPredicted RBP11.53□□□□□ -0.56
LMNA-222ENST00000508500 TEPPQ6URK8 271 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 IGF2BP2-AS1Q96M15 143 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 MED9Q9NWA0 146 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 HIGD1AQ9Y241 93 aa11.53□□□□□ -0.56
LMNA-222ENST00000508500 LOC102723971A0A1B0GUV8 181 aa11.52□□□□□ -0.57
LMNA-222ENST00000508500 HYPMO75409 117 aa11.52□□□□□ -0.57
LMNA-222ENST00000508500 OR5G3P0C626 314 aa11.52□□□□□ -0.57
LMNA-222ENST00000508500 FGF7P21781 194 aa11.52□□□□□ -0.57
LMNA-222ENST00000508500 SPINK13Q1W4C9 94 aa11.52□□□□□ -0.57
LMNA-222ENST00000508500 GOLT1BQ9Y3E0 138 aa11.52□□□□□ -0.57
LMNA-222ENST00000508500 YTHDF2Q9Y5A9 579 aaKnown RBP11.52□□□□□ -0.57
LMNA-222ENST00000508500 A0A087X0K7 114 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 LINC00862A6NCI5 91 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 M0R2Z0 102 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 HBE1P02100 147 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 NMBP08949 121 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 SELENOTP62341 195 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 AKR1C8PQ5T2L2 129 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 NIPSNAP3BQ9BS92 247 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 NDUFAF3Q9BU61 184 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 NPCDR1Q9BY65 106 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 PKD1P98161 4303 aa11.51□□□□□ -0.57
LMNA-222ENST00000508500 RPL7P18124 248 aaKnown RBP11.5□□□□□ -0.57
LMNA-222ENST00000508500 RPL29P47914 159 aaKnown RBP11.5□□□□□ -0.57
LMNA-222ENST00000508500 POM121L12Q8N7R1 296 aa11.5□□□□□ -0.57
LMNA-222ENST00000508500 PKHD1P08F94 4074 aa11.5□□□□□ -0.57
LMNA-222ENST00000508500 ZNF705GA8MUZ8 300 aaPredicted RBP11.49□□□□□ -0.57
LMNA-222ENST00000508500 AGPAT2O15120 278 aa11.49□□□□□ -0.57
LMNA-222ENST00000508500 DUSP14O95147 198 aaKnown RBP11.49□□□□□ -0.57
LMNA-222ENST00000508500 CAMLGP49069 296 aa11.49□□□□□ -0.57
LMNA-222ENST00000508500 RRN3P1Q2M238 152 aa11.49□□□□□ -0.57
LMNA-222ENST00000508500 MORN5Q5VZ52 161 aa11.49□□□□□ -0.57
LMNA-222ENST00000508500 MGST2Q99735 147 aa11.49□□□□□ -0.57
LMNA-222ENST00000508500 SH3BGRL3Q9H299 93 aa11.49□□□□□ -0.57
LMNA-222ENST00000508500 TRAV12-2A0A075B6T6 113 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 PLAC8L1A1L4L8 177 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 SNRPCP09234 159 aaKnown RBP11.48□□□□□ -0.57
LMNA-222ENST00000508500 AZU1P20160 251 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 S100A7P31151 101 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 PSG3Q16557 428 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 ACOT6Q3I5F7 207 aaPredicted RBP11.48□□□□□ -0.57
LMNA-222ENST00000508500 FAM74A1Q5RGS3 127 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 ZNF738Q8NE65 137 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 OR8A1Q8NGG7 326 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 LYPD6BQ8NI32 183 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 TMEM37Q8WXS4 190 aa11.48□□□□□ -0.57
LMNA-222ENST00000508500 DYNC1H1Q14204 4646 aaKnown RBP11.48□□□□□ -0.57
LMNA-222ENST00000508500 A0A1B0GVY2 172 aa11.47□□□□□ -0.57
LMNA-222ENST00000508500 TEX46H3BTG2 121 aa11.47□□□□□ -0.57
LMNA-222ENST00000508500 P0DMU3 169 aa11.47□□□□□ -0.57
LMNA-222ENST00000508500 FAM231AP0DMU4 169 aa11.47□□□□□ -0.57
LMNA-222ENST00000508500 FAM231CP0DMU5 169 aa11.47□□□□□ -0.57
LMNA-222ENST00000508500 LINC00305Q7Z4B0 112 aa11.47□□□□□ -0.57
LMNA-222ENST00000508500 TEX48A0A1B0GUV7 120 aa11.46□□□□□ -0.57
LMNA-222ENST00000508500 INSP01308 110 aa11.46□□□□□ -0.57
LMNA-222ENST00000508500 HTN3P15516 51 aa11.46□□□□□ -0.57
LMNA-222ENST00000508500 M6PRP20645 277 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 115.3 ms