RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 TAL2Q16559 108 aa13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 DOCK7Q96N67 2140 aa13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 MRPL51Q4U2R6 128 aaKnown RBP13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 TRBV19A0A075B6N1 114 aa13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 TRGV3P03979 118 aa13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 Q6ZR03 302 aa13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 TMEM14CQ9P0S9 112 aa13.85□□□□□ -0.19
HMGXB3-201ENST00000502717 LTAP01374 205 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 C17orf58Q2M2W7 97 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 THAP8Q8NA92 274 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 SRSF8Q9BRL6 282 aaKnown RBP13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 SCRT2Q9NQ03 307 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 LTBP2Q14767 1821 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 SPANXA1Q9NS26 97 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
HMGXB3-201ENST00000502717 ZNF833PQ6ZTB9 187 aa13.83□□□□□ -0.19
HMGXB3-201ENST00000502717 PRB3Q04118 309 aaPredicted RBP13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 TMEM178BH3BS89 294 aa13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 THBDP07204 575 aa13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 SNRPD3P62318 126 aaKnown RBP13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 LINC01545Q5VT33 79 aa13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 SSBP2P81877 361 aaPredicted RBP13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 PRSS22Q9GZN4 317 aa13.83□□□□□ -0.2
HMGXB3-201ENST00000502717 WT1-ASQ06250 92 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 Q8N8P6 123 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 TNFRSF18Q9Y5U5 241 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 CACNA1AO00555 2505 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 CEND1Q8N111 149 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 PPDPFLQ8WWR9 84 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 IGF2BP2-AS1Q96M15 143 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 TRBV20-1A0A075B6N2 111 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 DKK1O94907 266 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 IGLC1P0CG04 106 aa13.82□□□□□ -0.2
HMGXB3-201ENST00000502717 RNF182Q8N6D2 247 aa13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 ZNF407Q9C0G0 2248 aa13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 NPFFO15130 113 aa13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 IGLV2-14P01704 120 aa13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 DPH3P1Q9H4G8 78 aa13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 SAP30O75446 220 aa13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 KIF26AQ9ULI4 1882 aaPredicted RBP13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.81□□□□□ -0.29e-7■■■■■ 30.1
HMGXB3-201ENST00000502717 SUMO2P61956 95 aaKnown RBP13.81□□□□□ -0.2
HMGXB3-201ENST00000502717 OVOL1O14753 267 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 Q6ZS92 163 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 ZNRD1Q9P1U0 126 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 EFNA4P52798 201 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 SP5Q6BEB4 398 aaPredicted RBP13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 DTX1Q86Y01 620 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 FRMD6-AS1P0C7T7 363 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 NDUFS7O75251 213 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 ATXN8Q156A1 80 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 CRIP3Q6Q6R5 217 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 ZC2HC1AQ96GY0 325 aa13.8□□□□□ -0.2
HMGXB3-201ENST00000502717 IGHG3P01860 377 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 GATA4P43694 442 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 LINC00173Q6ZV60 143 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 C3orf56Q8N813 242 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 C8orf49Q96NF6 230 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 H3BMG7 143 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 PRSS33Q8NF86 280 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 TMEM95Q3KNT9 176 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 DUX5Q96PT3 197 aa13.79□□□□□ -0.2
HMGXB3-201ENST00000502717 KIAA1549LQ6ZVL6 1849 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 BUB1B-PAK6H3BSN5 160 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 PLEKHB2Q96CS7 222 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 NPYP01303 97 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 TMEM155Q4W5P6 130 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 ZNF295-AS1Q8N0V1 137 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 SRRM4A7MD48 611 aaKnown RBP13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 CD7P09564 240 aa13.78□□□□□ -0.2
HMGXB3-201ENST00000502717 NCOA6Q14686 2063 aaPredicted RBP13.77□□□□□ -0.2
HMGXB3-201ENST00000502717 MYMXA0A1B0GTQ4 84 aa13.77□□□□□ -0.2
HMGXB3-201ENST00000502717 B4DSR2 109 aa13.77□□□□□ -0.2
HMGXB3-201ENST00000502717 UBE2L6O14933 153 aa13.77□□□□□ -0.2
HMGXB3-201ENST00000502717 IGHV3OR16-12A0A075B7B8 117 aa13.77□□□□□ -0.21
HMGXB3-201ENST00000502717 TEX48A0A1B0GUV7 120 aa13.77□□□□□ -0.21
HMGXB3-201ENST00000502717 OBSL1O75147 1896 aa13.77□□□□□ -0.21
HMGXB3-201ENST00000502717 IGKV3-20P01619 116 aa13.77□□□□□ -0.21
HMGXB3-201ENST00000502717 SLC25A16P16260 332 aa13.77□□□□□ -0.21
HMGXB3-201ENST00000502717 DKK2Q9UBU2 259 aa13.77□□□□□ -0.21
HMGXB3-201ENST00000502717 K7ERJ3 54 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 K7EM74 188 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 C5orf64Q2M2E5 130 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 C9JAW5 83 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 M0R2P5 195 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 SIGLEC15Q6ZMC9 328 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 ZNF48Q96MX3 618 aaPredicted RBP13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 PRR25Q96S07 402 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 CADP27708 2225 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 VCYO14598 125 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 LCNL1Q6ZST4 164 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 C11orf53Q8IXP5 236 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 CUL9Q8IWT3 2517 aa13.76□□□□□ -0.21
HMGXB3-201ENST00000502717 C12orf74Q32Q52 190 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 C2orf82Q6UX34 121 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 Q6ZPA2 131 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 MRPL35Q9NZE8 188 aaKnown RBP13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 KLF12Q9Y4X4 402 aa13.75□□□□□ -0.21
HMGXB3-201ENST00000502717 WNK2Q9Y3S1 2297 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms