RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 ZNF738Q8NE65 137 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 TMPRSS5Q9H3S3 457 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 MAP6D1Q9H9H5 199 aa9.27□□□□□ -0.93
SNX17-208ENST00000493711 TRRAPQ9Y4A5 3859 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 A0A1B0GV50 99 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 PGPA6NDG6 321 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 F6UZH7 168 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 RGS13O14921 159 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 NMBP08949 121 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 SNRPCP09234 159 aaKnown RBP9.26□□□□□ -0.93
SNX17-208ENST00000493711 DEFB131AP59861 70 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 ODF3L2Q3SX64 289 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 CLLU1Q5K131 121 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 FOXI2Q6ZQN5 318 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 RPUSD4Q96CM3 377 aaKnown RBP9.26□□□□□ -0.93
SNX17-208ENST00000493711 GNG13Q9P2W3 67 aa9.26□□□□□ -0.93
SNX17-208ENST00000493711 FBLL1A6NHQ2 334 aaKnown RBP9.25□□□□□ -0.93
SNX17-208ENST00000493711 FAM74A7A6NL05 159 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 K7EQM0 130 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 PAGE4O60829 102 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 DUSP14O95147 198 aaKnown RBP9.25□□□□□ -0.93
SNX17-208ENST00000493711 SLC25A5P05141 298 aaKnown RBP9.25□□□□□ -0.93
SNX17-208ENST00000493711 KRTAP10-11P60412 298 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 SUMO1P63165 101 aaKnown RBP9.25□□□□□ -0.93
SNX17-208ENST00000493711 CCL20P78556 96 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 DEFA6Q01524 100 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 CST9LP1Q5W188 147 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 OR10J6PQ8NGY7 276 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 VAX2Q9UIW0 290 aa9.25□□□□□ -0.93
SNX17-208ENST00000493711 YTHDF2Q9Y5A9 579 aaKnown RBP9.25□□□□□ -0.93
SNX17-208ENST00000493711 RBAKDNA6NC62 111 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 NDUFS6O75380 124 aaKnown RBP9.24□□□□□ -0.93
SNX17-208ENST00000493711 CD7P09564 240 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 BCL2P10415 239 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 UBE2G2P60604 165 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 XP32Q5T750 250 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 EXOC3-AS1Q8N2X6 119 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 HIST1H2BAQ96A08 127 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 CLUHP3Q96NS8 147 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 SAV1Q9H4B6 383 aaPredicted RBP9.24□□□□□ -0.93
SNX17-208ENST00000493711 C19orf73Q9NVV2 129 aa9.24□□□□□ -0.93
SNX17-208ENST00000493711 A0A0J9YX75 114 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 GGTLC3B5MD39 225 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 C11orf94C9JXX5 98 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 PDE6DO43924 150 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 IGFL4Q6B9Z1 124 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 Q8N1Y9 231 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 OR8A1Q8NGG7 326 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 C20orf173Q96LM9 149 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 PRR25Q96S07 402 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 EPDR1Q9UM22 224 aa9.23□□□□□ -0.93
SNX17-208ENST00000493711 RBFOX3A6NFN3 312 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 A8MZ25 164 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 DIRC3C9JPN6 131 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 M0R3E3 92 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 S100A9P06702 114 aaKnown RBP9.22□□□□□ -0.93
SNX17-208ENST00000493711 HLA-DRB4P13762 266 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 NUTF2P61970 127 aaKnown RBP9.22□□□□□ -0.93
SNX17-208ENST00000493711 MEF2BQ02080 365 aaPredicted RBP9.22□□□□□ -0.93
SNX17-208ENST00000493711 STHQ8IWL8 128 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 CCDC28AQ8IWP9 274 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 LINC00477Q96M19 166 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 FAM210AQ96ND0 272 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 ATG101Q9BSB4 218 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 SMDT1Q9H4I9 107 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 TUBA4BQ9H853 241 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 HLA-DRB4X5D2U9 266 aa9.22□□□□□ -0.93
SNX17-208ENST00000493711 NOTCH3Q9UM47 2321 aa9.21□□□□□ -0.93
SNX17-208ENST00000493711 LOC102723971A0A1B0GUV8 181 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 ZNF705FA8MVS1 300 aaPredicted RBP9.21□□□□□ -0.94
SNX17-208ENST00000493711 TCRAP04437 139 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 HLA-DMBP28068 263 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 HIST1H1AQ02539 215 aaPredicted RBP9.21□□□□□ -0.94
SNX17-208ENST00000493711 HAGHQ16775 308 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 ZNF506Q5JVG8 444 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 ACTL10Q5JWF8 245 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 TMEM78Q5T7P6 136 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 APRG1Q8IVJ8 170 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 CYB561D1Q8N8Q1 229 aa9.21□□□□□ -0.94
SNX17-208ENST00000493711 EIF5A2Q9GZV4 153 aaKnown RBP9.21□□□□□ -0.94
SNX17-208ENST00000493711 TRBV7-9A0A0J9YWB2 115 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 NPIPB6E9PJ23 425 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 H3BMM0 161 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 PEX7O00628 323 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 GHRHP01286 108 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 AMBPP02760 352 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 TSPOP30536 169 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 PEA15Q15121 130 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 MORN3Q6PF18 240 aaPredicted RBP9.2□□□□□ -0.94
SNX17-208ENST00000493711 C9orf47Q6ZRZ4 202 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 GOLT1AQ6ZVE7 132 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 Q8N3U1 123 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 DEFB125Q8N687 156 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 ODF3Q96PU9 254 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 SRD5A3Q9H8P0 318 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 MED9Q9NWA0 146 aa9.2□□□□□ -0.94
SNX17-208ENST00000493711 PPP1R14DQ9NXH3 145 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms