RNA–Protein interactions for RNA: ENST00000491659.5

USP39-217, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 648 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-217ENST00000491659 OR10J6PQ8NGY7 276 aa10.8□□□□□ -0.68
USP39-217ENST00000491659 DKK2Q9UBU2 259 aa10.8□□□□□ -0.68
USP39-217ENST00000491659 YTHDF2Q9Y5A9 579 aaKnown RBP10.8□□□□□ -0.68
USP39-217ENST00000491659 HYDINQ4G0P3 5121 aa10.79□□□□□ -0.68
USP39-217ENST00000491659 ZNF253O75346 499 aa10.79□□□□□ -0.68
USP39-217ENST00000491659 PRB4P10163 310 aaPredicted RBP10.79□□□□□ -0.68
USP39-217ENST00000491659 CDKN1BP46527 198 aa10.79□□□□□ -0.68
USP39-217ENST00000491659 TMEM256Q8N2U0 113 aa10.79□□□□□ -0.68
USP39-217ENST00000491659 ST6GAL2Q96JF0 529 aa10.79□□□□□ -0.68
USP39-217ENST00000491659 NIPSNAP3BQ9BS92 247 aa10.79□□□□□ -0.68
USP39-217ENST00000491659 ZNF705GA8MUZ8 300 aaPredicted RBP10.78□□□□□ -0.68
USP39-217ENST00000491659 C17orf112F2Z3M2 114 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 MPC2O95563 127 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 CD300CQ08708 224 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 TCTE3Q8IZS6 198 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 SAT2Q96F10 170 aaPredicted RBP10.78□□□□□ -0.68
USP39-217ENST00000491659 ATP5SQ99766 215 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 WDR61Q9GZS3 305 aaKnown RBP10.78□□□□□ -0.68
USP39-217ENST00000491659 ZNF586Q9NXT0 402 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 TMEM14CQ9P0S9 112 aa10.78□□□□□ -0.68
USP39-217ENST00000491659 TSPOP30536 169 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 DAD1P61803 113 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 GCSAMLQ5JQS6 135 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 RPP25LQ8N5L8 163 aaKnown RBP10.77□□□□□ -0.69
USP39-217ENST00000491659 LINC01587Q99440 93 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 NDUFAF3Q9BU61 184 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 HSPB11Q9Y547 144 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 TIMM9Q9Y5J7 89 aa10.77□□□□□ -0.69
USP39-217ENST00000491659 TRBV19A0A075B6N1 114 aa10.76□□□□□ -0.69
USP39-217ENST00000491659 PRAC2D3DTV9 90 aa10.76□□□□□ -0.69
USP39-217ENST00000491659 HIST1H1EP10412 219 aaKnown RBP10.76□□□□□ -0.69
USP39-217ENST00000491659 PDE6HQ13956 83 aa10.76□□□□□ -0.69
USP39-217ENST00000491659 MRPL53Q96EL3 112 aaKnown RBP10.76□□□□□ -0.69
USP39-217ENST00000491659 MRPL32Q9BYC8 188 aaKnown RBP10.76□□□□□ -0.69
USP39-217ENST00000491659 MBD2Q9UBB5 411 aa10.76□□□□□ -0.69
USP39-217ENST00000491659 LYRM9A8MSI8 78 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 IFNA5P01569 189 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 PYYP10082 97 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 HTN3P15516 51 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 RPL12P30050 165 aaKnown RBP10.75□□□□□ -0.69
USP39-217ENST00000491659 TAS2R60P59551 318 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 FCN2Q15485 313 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 BLNKQ8WV28 456 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 C16orf74Q96GX8 76 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 C20orf144Q9BQM9 153 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 SLC25A2Q9BXI2 301 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 AAMDCQ9H7C9 122 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 PRELID1Q9Y255 219 aa10.75□□□□□ -0.69
USP39-217ENST00000491659 NPIPB6E9PJ23 425 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 H7BYZ3 331 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 C1QBP02746 253 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 PRM2P04554 102 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 HTN1P15515 57 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 LEPP41159 167 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 MIR17HGQ75NE6 70 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 SCGB1C1Q8TD33 95 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 FAM210BQ96KR6 192 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 ODF3Q96PU9 254 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 PARD6GQ9BYG4 376 aaPredicted RBP10.74□□□□□ -0.69
USP39-217ENST00000491659 SMIM3Q9BZL3 60 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 PLA2G2EQ9NZK7 142 aa10.74□□□□□ -0.69
USP39-217ENST00000491659 M0R3E3 92 aa10.73□□□□□ -0.69
USP39-217ENST00000491659 NDUFB4O95168 129 aa10.73□□□□□ -0.69
USP39-217ENST00000491659 GFI1BQ5VTD9 330 aa10.73□□□□□ -0.69
USP39-217ENST00000491659 OR51M1Q9H341 326 aa10.73□□□□□ -0.69
USP39-217ENST00000491659 FUT9Q9Y231 359 aa10.73□□□□□ -0.69
USP39-217ENST00000491659 J3KRW8 73 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 P0DMU3 169 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 FAM231AP0DMU4 169 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 FAM231CP0DMU5 169 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 CT45A10P0DMU9 189 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 AZU1P20160 251 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 FFAR4Q5NUL3 377 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 ZNF493Q6ZR52 646 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 TMEM263Q8WUH6 116 aaKnown RBP10.72□□□□□ -0.69
USP39-217ENST00000491659 FAM167A-AS1Q96KT0 104 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 HYLS1Q96M11 299 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 PAXXQ9BUH6 204 aa10.72□□□□□ -0.69
USP39-217ENST00000491659 OR7C2O60412 319 aa10.71□□□□□ -0.69
USP39-217ENST00000491659 ICAM4Q14773 271 aa10.71□□□□□ -0.69
USP39-217ENST00000491659 KIR3DS1Q14943 382 aa10.71□□□□□ -0.69
USP39-217ENST00000491659 EXOC3-AS1Q8N2X6 119 aa10.71□□□□□ -0.69
USP39-217ENST00000491659 ASB13Q8WXK3 278 aa10.71□□□□□ -0.69
USP39-217ENST00000491659 PLAC8L1A1L4L8 177 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 OR10J4P0C629 311 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 NBEAP1P0C6P0 100 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 DEFB130BP0DP73 79 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 DEFB130AP0DP74 79 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 KHDC3LQ587J8 217 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 CCDC28AQ8IWP9 274 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 FXYD5Q96DB9 178 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 TIMM8BQ9Y5J9 83 aaPredicted RBP10.7□□□□□ -0.7
USP39-217ENST00000491659 VPS13DQ5THJ4 4388 aa10.7□□□□□ -0.7
USP39-217ENST00000491659 TRAV12-3A0A0B4J271 114 aa10.69□□□□□ -0.7
USP39-217ENST00000491659 SLC25A5P05141 298 aaKnown RBP10.69□□□□□ -0.7
USP39-217ENST00000491659 NKX2-5P52952 324 aaPredicted RBP10.69□□□□□ -0.7
USP39-217ENST00000491659 TAS2R45P59539 299 aa10.69□□□□□ -0.7
USP39-217ENST00000491659 UBE2L3P68036 154 aaKnown RBP10.69□□□□□ -0.7
USP39-217ENST00000491659 FAM122CQ6P4D5 195 aa10.69□□□□□ -0.7
USP39-217ENST00000491659 TMEM88Q6PEY1 159 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms