RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 BLNKQ8WV28 456 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 TMED6Q8WW62 240 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 RPUSD4Q96CM3 377 aaKnown RBP11.65□□□□□ -0.54
TRA2A-208ENST00000490942 SPATA25Q9BR10 227 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 TP53TG1Q9Y2A0 90 aa11.65□□□□□ -0.54
TRA2A-208ENST00000490942 H3BTX0 84 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 GCHFRP30047 84 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 FAM74A1Q5RGS3 127 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 IGFL4Q6B9Z1 124 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 RXFP4Q8TDU9 374 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 MBD3L1Q8WWY6 194 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 C1QTNF4Q9BXJ3 329 aa11.64□□□□□ -0.55
TRA2A-208ENST00000490942 SNRPCP09234 159 aaKnown RBP11.63□□□□□ -0.55
TRA2A-208ENST00000490942 RPL35AP18077 110 aaKnown RBP11.63□□□□□ -0.55
TRA2A-208ENST00000490942 GDF5OSQ5U4N7 250 aa11.63□□□□□ -0.55
TRA2A-208ENST00000490942 ZMAT4Q9H898 229 aa11.63□□□□□ -0.55
TRA2A-208ENST00000490942 OTORQ9NRC9 128 aa11.63□□□□□ -0.55
TRA2A-208ENST00000490942 PLA2G2EQ9NZK7 142 aa11.63□□□□□ -0.55
TRA2A-208ENST00000490942 MAP1LC3B2A6NCE7 125 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
TRA2A-208ENST00000490942 HLA-DMBP28068 263 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 SULT1A2P50226 295 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 CNN1P51911 297 aaKnown RBP11.62□□□□□ -0.55
TRA2A-208ENST00000490942 RANP62826 216 aaKnown RBP11.62□□□□□ -0.55
TRA2A-208ENST00000490942 ICAM4Q14773 271 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 SSX7Q7RTT5 188 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 NKX6-2Q9C056 277 aaPredicted RBP11.62□□□□□ -0.55
TRA2A-208ENST00000490942 MAP1LC3BQ9GZQ8 125 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 Q9H3A6 140 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 ARL2-SNX15V9GYD0 113 aa11.62□□□□□ -0.55
TRA2A-208ENST00000490942 TRAV1-1A0A0B4J248 108 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 A0A1W2PRE2 83 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 F6UB75 175 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 AMBPP02760 352 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 CSN1S1P47710 185 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 EXOC3-AS1Q8N2X6 119 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 OR10J6PQ8NGY7 276 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 FAM213BQ8TBF2 198 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 ODF3Q96PU9 254 aa11.61□□□□□ -0.55
TRA2A-208ENST00000490942 RBAKDNA6NC62 111 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 NPIPB6E9PJ23 425 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 M0R3E3 92 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 EIF3GO75821 320 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRA2A-208ENST00000490942 SLC25A5P05141 298 aaKnown RBP11.6□□□□□ -0.55
TRA2A-208ENST00000490942 H2AFB1P0C5Y9 115 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 FHITP49789 147 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 NKX2-5P52952 324 aaPredicted RBP11.6□□□□□ -0.55
TRA2A-208ENST00000490942 AMTNQ6UX39 209 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 OR4B1Q8NGF8 309 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 RNF183Q96D59 192 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 ASCL2Q99929 193 aa11.6□□□□□ -0.55
TRA2A-208ENST00000490942 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 SERTM2A0A1B0GWG4 89 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 ZNF705FA8MVS1 300 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-208ENST00000490942 TEX46H3BTG2 121 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 CA1P00915 261 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-208ENST00000490942 GIG44P09565 113 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-208ENST00000490942 PPT1P50897 306 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 DEFB1P60022 68 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 HIST1H1AQ02539 215 aaPredicted RBP11.59□□□□□ -0.55
TRA2A-208ENST00000490942 C9orf47Q6ZRZ4 202 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 CMTM2Q8TAZ6 248 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 SFT2D1Q8WV19 159 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 LINC00477Q96M19 166 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 TCEAL7Q9BRU2 100 aa11.59□□□□□ -0.55
TRA2A-208ENST00000490942 PRAC2D3DTV9 90 aa11.58□□□□□ -0.56
TRA2A-208ENST00000490942 C5orf17Q8NAS9 161 aa11.58□□□□□ -0.56
TRA2A-208ENST00000490942 RCHY1Q96PM5 261 aa11.58□□□□□ -0.56
TRA2A-208ENST00000490942 AGRNO00468 2067 aa11.58□□□□□ -0.56
TRA2A-208ENST00000490942 DNAH9Q9NYC9 4486 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 PGPA6NDG6 321 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 BOLA2-SMG1P6H3BVE0 249 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 SPRY2O43597 315 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 HBE1P02100 147 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 NMBP08949 121 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 TSPOP30536 169 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 PMS2P11Q13670 270 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 CSNK1G2-AS1Q8NCQ2 148 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 OVOL2Q9BRP0 275 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 PPP1R14DQ9NXH3 145 aa11.57□□□□□ -0.56
TRA2A-208ENST00000490942 FBLL1A6NHQ2 334 aaKnown RBP11.56□□□□□ -0.56
TRA2A-208ENST00000490942 DIRC3C9JPN6 131 aa11.56□□□□□ -0.56
TRA2A-208ENST00000490942 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
TRA2A-208ENST00000490942 DEFB135Q30KP9 77 aa11.56□□□□□ -0.56
TRA2A-208ENST00000490942 IQCF2Q8IXL9 164 aa11.56□□□□□ -0.56
TRA2A-208ENST00000490942 LENEPQ9Y5L5 61 aa11.56□□□□□ -0.56
TRA2A-208ENST00000490942 U3KQK5 164 aa11.56□□□□□ -0.56
TRA2A-208ENST00000490942 FAM74A7A6NL05 159 aa11.55□□□□□ -0.56
TRA2A-208ENST00000490942 IGKV3-20P01619 116 aa11.55□□□□□ -0.56
TRA2A-208ENST00000490942 CDKN1BP46527 198 aa11.55□□□□□ -0.56
TRA2A-208ENST00000490942 IGF2BP2-AS1Q96M15 143 aa11.55□□□□□ -0.56
TRA2A-208ENST00000490942 C20orf144Q9BQM9 153 aa11.55□□□□□ -0.56
TRA2A-208ENST00000490942 TMPRSS5Q9H3S3 457 aa11.55□□□□□ -0.56
TRA2A-208ENST00000490942 ZNF705EA8MWA4 302 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-208ENST00000490942 GGTLC3B5MD39 225 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 K7EQM0 130 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 ZNF705DP0CH99 300 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-208ENST00000490942 ZNF705BP0CI00 300 aaPredicted RBP11.54□□□□□ -0.56
TRA2A-208ENST00000490942 LEPP41159 167 aa11.54□□□□□ -0.56
TRA2A-208ENST00000490942 SUMO1P63165 101 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 168 ms