RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 IBA57Q5T440 356 aaKnown RBP4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 LPCAT3Q6P1A2 487 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 WDR73Q6P4I2 378 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 TMEM182Q6ZP80 229 aaPredicted RBP4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 LYSMD2Q8IV50 215 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 DHRSXQ8N5I4 330 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 EIF4E3Q8N5X7 224 aaKnown RBP4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 ZBTB8BQ8NAP8 495 aaPredicted RBP4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 CLRN3Q8NCR9 226 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 ODF3Q96PU9 254 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 MGLLQ99685 303 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 IFT46Q9NQC8 304 aa4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.49□□□□□ -1.69
PDLIM1-203ENST00000490391 TRAV8-6A0A0B4J262 113 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 TRDV1A0A1B0GX56 115 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 CEBPZOSA8MTT3 80 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 MRPS12O15235 138 aaKnown RBP4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 ATG12O94817 140 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 PPT1P50897 306 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 CIRBPQ14011 172 aaKnown RBP4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 MEF2DQ14814 521 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 TRIM16LQ309B1 348 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 C22orf42Q6IC83 251 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 STEAP1BQ6NZ63 245 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 SH2D6Q7Z4S9 175 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 NOXA1Q86UR1 476 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 FAM219AQ8IW50 185 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 OR10G4Q8NGN3 311 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 ATP6V0E2Q8NHE4 81 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 SLC35E1Q96K37 410 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 DNAJC30Q96LL9 226 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 SHANK2-AS3Q9BTD1 123 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 TP53TG3Q9ULZ0 132 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 COX11Q9Y6N1 276 aa4.48□□□□□ -1.69
PDLIM1-203ENST00000490391 KLLNB2CW77 178 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 CFDP00746 253 aaPredicted RBP4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 RPL7P18124 248 aaKnown RBP4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 ORM2P19652 201 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 HLA-DMAP28067 261 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 PIGPP57054 158 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 RNF151Q2KHN1 245 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 SP6Q3SY56 376 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 FFAR4Q5NUL3 377 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 GGNBP1Q5YKI7 109 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 DAZ4Q86SG3 579 aaKnown RBP4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 LHFPL5Q8TAF8 219 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 DUSP21Q9H596 190 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 S100A14Q9HCY8 104 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 ZNF331Q9NQX6 463 aaPredicted RBP4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 DAZ3Q9NR90 486 aaKnown RBP4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 NDUFB11Q9NX14 153 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 U3KQ87 197 aa4.47□□□□□ -1.69
PDLIM1-203ENST00000490391 C3orf85A0A1B0GTC6 90 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 C7orf71A4D174 169 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 GABARAPH6UMI1 98 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 GABARAPO95166 117 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 SLC25A5P05141 298 aaKnown RBP4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 RPS19P39019 145 aaKnown RBP4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 LEPP41159 167 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 BTN1A1Q13410 526 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 Q6ZQT7 251 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 C10orf67Q8IYJ2 551 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 LGI3Q8N145 548 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 C9orf163Q8N9P6 203 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 NHLRC2Q8NBF2 726 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 ZNF486Q96H40 463 aaPredicted RBP4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 TMEM147Q9BVK8 224 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 KIF25-AS1Q9Y6Z4 181 aa4.46□□□□□ -1.7
PDLIM1-203ENST00000490391 KRTAP23-1A1A580 65 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 PMS2P5A8MQ11 134 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 SLC17A3O00476 420 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 PHOX2AO14813 284 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 CDS2O95674 445 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 CXCL2P19875 107 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 RCVRNP35243 200 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 TSPAN5P62079 268 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 GPR107Q5VW38 600 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 LCN15Q6UWW0 184 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 SDIM1Q6ZPB5 146 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 LHFPL1Q86WI0 220 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 BPIFCQ8NFQ6 507 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 OR10P1Q8NGE3 313 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 RNASE11Q8TAA1 199 aaKnown RBP4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 RASL10AQ92737 203 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 FAM19A4Q96LR4 140 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 TMEM222Q9H0R3 208 aa4.45□□□□□ -1.7
PDLIM1-203ENST00000490391 IGKV2D-24A0A075B6R9 120 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 TRAV8-1A0A0A6YYK1 113 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 PRSS46E5RG02 174 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 MPDU1O75352 247 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 SNRPCP09234 159 aaKnown RBP4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 CLEC2LP0C7M8 214 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 PGAM2P15259 253 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 GATA1P15976 413 aaPredicted RBP4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 ATP5IP56385 69 aaPredicted RBP4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 PRR3P79522 188 aaKnown RBP4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 C4orf46Q504U0 113 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 TOR2AQ5JU69 321 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 PRR9Q5T870 116 aa4.44□□□□□ -1.7
PDLIM1-203ENST00000490391 ATRAIDQ6UW56 229 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms