RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 ZNF253O75346 499 aa12.46□□□□□ -0.41
SEC13-218ENST00000490283 HTN3P15516 51 aa12.46□□□□□ -0.41
SEC13-218ENST00000490283 PPP1R1CQ8WVI7 109 aa12.46□□□□□ -0.41
SEC13-218ENST00000490283 FAM210BQ96KR6 192 aa12.46□□□□□ -0.41
SEC13-218ENST00000490283 LYRM9A8MSI8 78 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 C17orf112F2Z3M2 114 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 P0DMU3 169 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 FAM231AP0DMU4 169 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 FAM231CP0DMU5 169 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 SAT2Q96F10 170 aaPredicted RBP12.45□□□□□ -0.42
SEC13-218ENST00000490283 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 TIMM9Q9Y5J7 89 aa12.45□□□□□ -0.42
SEC13-218ENST00000490283 PRB4P10163 310 aaPredicted RBP12.44□□□□□ -0.42
SEC13-218ENST00000490283 HTN1P15515 57 aa12.44□□□□□ -0.42
SEC13-218ENST00000490283 H2BFSP57053 126 aa12.44□□□□□ -0.42
SEC13-218ENST00000490283 TAS2R60P59551 318 aa12.44□□□□□ -0.42
SEC13-218ENST00000490283 C20orf144Q9BQM9 153 aa12.44□□□□□ -0.42
SEC13-218ENST00000490283 ZNF586Q9NXT0 402 aa12.44□□□□□ -0.42
SEC13-218ENST00000490283 TRBV19A0A075B6N1 114 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 H0YIZ8 118 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 HIST1H1EP10412 219 aaKnown RBP12.43□□□□□ -0.42
SEC13-218ENST00000490283 LEPP41159 167 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 PDE6HQ13956 83 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 MRPL53Q96EL3 112 aaKnown RBP12.43□□□□□ -0.42
SEC13-218ENST00000490283 C16orf74Q96GX8 76 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 ATP5SQ99766 215 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 WDR61Q9GZS3 305 aaKnown RBP12.43□□□□□ -0.42
SEC13-218ENST00000490283 AAMDCQ9H7C9 122 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 PRELID1Q9Y255 219 aa12.43□□□□□ -0.42
SEC13-218ENST00000490283 PRAC2D3DTV9 90 aa12.42□□□□□ -0.42
SEC13-218ENST00000490283 H7BYZ3 331 aa12.42□□□□□ -0.42
SEC13-218ENST00000490283 MPC2O95563 127 aa12.42□□□□□ -0.42
SEC13-218ENST00000490283 MRPL32Q9BYC8 188 aaKnown RBP12.42□□□□□ -0.42
SEC13-218ENST00000490283 PLA2G2EQ9NZK7 142 aa12.42□□□□□ -0.42
SEC13-218ENST00000490283 IFNA5P01569 189 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 GCSAMLQ5JQS6 135 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 CCDC28AQ8IWP9 274 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 SCGB1C1Q8TD33 95 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 BLNKQ8WV28 456 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 HSPB11Q9Y547 144 aa12.41□□□□□ -0.42
SEC13-218ENST00000490283 NPIPB6E9PJ23 425 aa12.4□□□□□ -0.42
SEC13-218ENST00000490283 PRM2P04554 102 aa12.4□□□□□ -0.42
SEC13-218ENST00000490283 DEFB130BP0DP73 79 aa12.4□□□□□ -0.42
SEC13-218ENST00000490283 DEFB130AP0DP74 79 aa12.4□□□□□ -0.42
SEC13-218ENST00000490283 PYYP10082 97 aa12.4□□□□□ -0.42
SEC13-218ENST00000490283 RPL12P30050 165 aaKnown RBP12.4□□□□□ -0.42
SEC13-218ENST00000490283 UBE2DNLQ8IWF7 75 aa12.4□□□□□ -0.42
SEC13-218ENST00000490283 AZU1P20160 251 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 GFI1BQ5VTD9 330 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 MIR17HGQ75NE6 70 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 POM121L12Q8N7R1 296 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 TMEM263Q8WUH6 116 aaKnown RBP12.39□□□□□ -0.43
SEC13-218ENST00000490283 SLC25A2Q9BXI2 301 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 PARD6GQ9BYG4 376 aaPredicted RBP12.39□□□□□ -0.43
SEC13-218ENST00000490283 OR51M1Q9H341 326 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 MBD2Q9UBB5 411 aa12.39□□□□□ -0.43
SEC13-218ENST00000490283 TIMM8BQ9Y5J9 83 aaPredicted RBP12.39□□□□□ -0.43
SEC13-218ENST00000490283 J3KRW8 73 aa12.38□□□□□ -0.43
SEC13-218ENST00000490283 M0R3E3 92 aa12.38□□□□□ -0.43
SEC13-218ENST00000490283 PAXXQ9BUH6 204 aa12.38□□□□□ -0.43
SEC13-218ENST00000490283 FUT9Q9Y231 359 aa12.38□□□□□ -0.43
SEC13-218ENST00000490283 OR7C2O60412 319 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 NDUFB4O95168 129 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 PTTG1O95997 202 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 ATP5G1P05496 136 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 NBEAP1P0C6P0 100 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 CT45A10P0DMU9 189 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 ATP5G3P48201 142 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 FFAR4Q5NUL3 377 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 TMEM88Q6PEY1 159 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 C15orf53Q8NAA6 179 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 LINC00477Q96M19 166 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 SMIM3Q9BZL3 60 aa12.37□□□□□ -0.43
SEC13-218ENST00000490283 PLAC8L1A1L4L8 177 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 F5H768 121 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 SLC25A5P05141 298 aaKnown RBP12.36□□□□□ -0.43
SEC13-218ENST00000490283 TAS2R45P59539 299 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 ICAM4Q14773 271 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 EXOC3-AS1Q8N2X6 119 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 RNASE8Q8TDE3 154 aaKnown RBP12.36□□□□□ -0.43
SEC13-218ENST00000490283 FAM167A-AS1Q96KT0 104 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 NOP10Q9NPE3 64 aaKnown RBP12.36□□□□□ -0.43
SEC13-218ENST00000490283 ALG5Q9Y673 324 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 EPPK1P58107 5090 aaKnown RBP12.36□□□□□ -0.43
SEC13-218ENST00000490283 KMT2AQ03164 3969 aa12.36□□□□□ -0.43
SEC13-218ENST00000490283 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 CBY3A6NI87 242 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 SNURFLB1AK76 121 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 OR10J4P0C629 311 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 KIR3DS1Q14943 382 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 KHDC3LQ587J8 217 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 TMEM78Q5T7P6 136 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 FAM122CQ6P4D5 195 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 RNF141Q8WVD5 230 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 PYGO2Q9BRQ0 406 aa12.35□□□□□ -0.43
SEC13-218ENST00000490283 CSN1S1P47710 185 aa12.34□□□□□ -0.43
SEC13-218ENST00000490283 UBE2L3P68036 154 aaKnown RBP12.34□□□□□ -0.43
SEC13-218ENST00000490283 ERCC8Q13216 396 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms