RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 DEFB130BP0DP73 79 aa9.94□□□□□ -0.82
VTI1A-206ENST00000489142 DEFB130AP0DP74 79 aa9.94□□□□□ -0.82
VTI1A-206ENST00000489142 PYYP10082 97 aa9.94□□□□□ -0.82
VTI1A-206ENST00000489142 H2BFSP57053 126 aa9.94□□□□□ -0.82
VTI1A-206ENST00000489142 NMES1Q9C002 83 aa9.94□□□□□ -0.82
VTI1A-206ENST00000489142 PRAF2O60831 178 aa9.93□□□□□ -0.82
VTI1A-206ENST00000489142 CDKN1BP46527 198 aa9.93□□□□□ -0.82
VTI1A-206ENST00000489142 ATP6V1FQ16864 119 aa9.93□□□□□ -0.82
VTI1A-206ENST00000489142 OR10J6PQ8NGY7 276 aa9.93□□□□□ -0.82
VTI1A-206ENST00000489142 DNAH10Q8IVF4 4471 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 E5RGE8 158 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 M0R2N4 97 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 M0R3E3 92 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 SSNA1O43805 119 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 RLN2P04090 185 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 TMEM88Q6PEY1 159 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 BLNKQ8WV28 456 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 MARVELD1Q9BSK0 173 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 SLC25A31Q9H0C2 315 aa9.92□□□□□ -0.82
VTI1A-206ENST00000489142 TRBV19A0A075B6N1 114 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 MPDU1O75352 247 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 P0DMU3 169 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 FAM231AP0DMU4 169 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 FAM231CP0DMU5 169 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 CT45A10P0DMU9 189 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 DEFA1P59665 94 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 DEFA3P59666 94 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 ERCC8Q13216 396 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 OXA1LQ15070 435 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 GUK1Q16774 197 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 GFI1BQ5VTD9 330 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 MIR17HGQ75NE6 70 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 UBE2DNLQ8IWF7 75 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 TMEM256Q8N2U0 113 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 POM121L12Q8N7R1 296 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 CHAC2Q8WUX2 184 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 PPP1R1CQ8WVI7 109 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 SLC25A2Q9BXI2 301 aa9.91□□□□□ -0.82
VTI1A-206ENST00000489142 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 NDUFB4O95168 129 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 TSPOP30536 169 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 TAS2R60P59551 318 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 EXOC3-AS1Q8N2X6 119 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 SMIM3Q9BZL3 60 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 TIMM9Q9Y5J7 89 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 NACAE9PAV3 2078 aa9.9□□□□□ -0.82
VTI1A-206ENST00000489142 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
VTI1A-206ENST00000489142 TRAV12-3A0A0B4J271 114 aa9.89□□□□□ -0.83
VTI1A-206ENST00000489142 NPIPB6E9PJ23 425 aa9.89□□□□□ -0.83
VTI1A-206ENST00000489142 HIST1H1EP10412 219 aaKnown RBP9.89□□□□□ -0.83
VTI1A-206ENST00000489142 CYCSP99999 105 aaKnown RBP9.89□□□□□ -0.83
VTI1A-206ENST00000489142 RNASE8Q8TDE3 154 aaKnown RBP9.89□□□□□ -0.83
VTI1A-206ENST00000489142 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
VTI1A-206ENST00000489142 WDR61Q9GZS3 305 aaKnown RBP9.89□□□□□ -0.83
VTI1A-206ENST00000489142 NOP10Q9NPE3 64 aaKnown RBP9.89□□□□□ -0.83
VTI1A-206ENST00000489142 TMEM14CQ9P0S9 112 aa9.89□□□□□ -0.83
VTI1A-206ENST00000489142 F5H768 121 aa9.88□□□□□ -0.83
VTI1A-206ENST00000489142 MPC2O95563 127 aa9.88□□□□□ -0.83
VTI1A-206ENST00000489142 OR10J4P0C629 311 aa9.88□□□□□ -0.83
VTI1A-206ENST00000489142 FAM210BQ96KR6 192 aa9.88□□□□□ -0.83
VTI1A-206ENST00000489142 FAM167A-AS1Q96KT0 104 aa9.88□□□□□ -0.83
VTI1A-206ENST00000489142 MBD2Q9UBB5 411 aa9.88□□□□□ -0.83
VTI1A-206ENST00000489142 IGKV2-40A0A087WW87 121 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-206ENST00000489142 H7BYZ3 331 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 ZNF253O75346 499 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 EIF3GO75821 320 aaKnown RBP eCLIP9.87□□□□□ -0.83
VTI1A-206ENST00000489142 IGKV2D-40P01614 121 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-206ENST00000489142 LEPP41159 167 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 ICAM4Q14773 271 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 FAM122CQ6P4D5 195 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 TMEM263Q8WUH6 116 aaKnown RBP9.87□□□□□ -0.83
VTI1A-206ENST00000489142 ATP5SQ99766 215 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 HSPB11Q9Y547 144 aa9.87□□□□□ -0.83
VTI1A-206ENST00000489142 TIMM8BQ9Y5J9 83 aaPredicted RBP9.87□□□□□ -0.83
VTI1A-206ENST00000489142 HECTD4Q9Y4D8 3996 aa9.86□□□□□ -0.83
VTI1A-206ENST00000489142 MRPL53Q96EL3 112 aaKnown RBP9.86□□□□□ -0.83
VTI1A-206ENST00000489142 PHYHIPLQ96FC7 376 aa9.86□□□□□ -0.83
VTI1A-206ENST00000489142 ALG5Q9Y673 324 aa9.86□□□□□ -0.83
VTI1A-206ENST00000489142 NUDT3O95989 172 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 ATP5G1P05496 136 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 RPL12P30050 165 aaKnown RBP9.85□□□□□ -0.83
VTI1A-206ENST00000489142 ATP5G3P48201 142 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 CD300CQ08708 224 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 BTN1A1Q13410 526 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 PDE6HQ13956 83 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 FFAR4Q5NUL3 377 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 CCDC28AQ8IWP9 274 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 FXYD5Q96DB9 178 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 ODF3Q96PU9 254 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 VGLL1Q99990 258 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 C20orf144Q9BQM9 153 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 PAXXQ9BUH6 204 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 AGPAT4-IT1Q9H0P7 198 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 OR51M1Q9H341 326 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 AAMDCQ9H7C9 122 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 WFDC1Q9HC57 220 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 BATF3Q9NR55 127 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 KCNIP2Q9NS61 270 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 FUT9Q9Y231 359 aa9.85□□□□□ -0.83
VTI1A-206ENST00000489142 GAGE12BA1L429 117 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 1040.8 ms