RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 NIPSNAP3BQ9BS92 247 aa17.8■□□□□ 0.44
HMGN1-217ENST00000489072 ZNF586Q9NXT0 402 aa17.8■□□□□ 0.44
HMGN1-217ENST00000489072 TEX48A0A1B0GUV7 120 aa17.79■□□□□ 0.44
HMGN1-217ENST00000489072 SSNA1O43805 119 aa17.79■□□□□ 0.44
HMGN1-217ENST00000489072 CLINT1Q14677 625 aa17.79■□□□□ 0.44
HMGN1-217ENST00000489072 PPP1R14DQ9NXH3 145 aa17.79■□□□□ 0.44
HMGN1-217ENST00000489072 GUK1Q16774 197 aa17.78■□□□□ 0.44
HMGN1-217ENST00000489072 PARD6GQ9BYG4 376 aaPredicted RBP17.77■□□□□ 0.44
HMGN1-217ENST00000489072 AZU1P20160 251 aa17.76■□□□□ 0.43
HMGN1-217ENST00000489072 KIR3DS1Q14943 382 aa17.76■□□□□ 0.43
HMGN1-217ENST00000489072 TMEM14CQ9P0S9 112 aa17.76■□□□□ 0.43
HMGN1-217ENST00000489072 TRBV19A0A075B6N1 114 aa17.75■□□□□ 0.43
HMGN1-217ENST00000489072 MPC2O95563 127 aa17.75■□□□□ 0.43
HMGN1-217ENST00000489072 PYYP10082 97 aa17.75■□□□□ 0.43
HMGN1-217ENST00000489072 CDKN1BP46527 198 aa17.75■□□□□ 0.43
HMGN1-217ENST00000489072 OXA1LQ15070 435 aa17.75■□□□□ 0.43
HMGN1-217ENST00000489072 OR10J6PQ8NGY7 276 aa17.75■□□□□ 0.43
HMGN1-217ENST00000489072 WDR61Q9GZS3 305 aaKnown RBP17.75■□□□□ 0.43
HMGN1-217ENST00000489072 PLAC8L1A1L4L8 177 aa17.74■□□□□ 0.43
HMGN1-217ENST00000489072 ZNF253O75346 499 aa17.74■□□□□ 0.43
HMGN1-217ENST00000489072 NDUFB4O95168 129 aa17.74■□□□□ 0.43
HMGN1-217ENST00000489072 TSPOP30536 169 aa17.74■□□□□ 0.43
HMGN1-217ENST00000489072 LINC01587Q99440 93 aa17.74■□□□□ 0.43
HMGN1-217ENST00000489072 NDUFAF3Q9BU61 184 aa17.74■□□□□ 0.43
HMGN1-217ENST00000489072 DAD1P61803 113 aa17.73■□□□□ 0.43
HMGN1-217ENST00000489072 TMEM256Q8N2U0 113 aa17.73■□□□□ 0.43
HMGN1-217ENST00000489072 FAM167A-AS1Q96KT0 104 aa17.73■□□□□ 0.43
HMGN1-217ENST00000489072 SLC25A2Q9BXI2 301 aa17.73■□□□□ 0.43
HMGN1-217ENST00000489072 HIST1H1EP10412 219 aaKnown RBP17.72■□□□□ 0.43
HMGN1-217ENST00000489072 HTN3P15516 51 aa17.72■□□□□ 0.43
HMGN1-217ENST00000489072 MIR17HGQ75NE6 70 aa17.72■□□□□ 0.43
HMGN1-217ENST00000489072 HSPB11Q9Y547 144 aa17.72■□□□□ 0.43
HMGN1-217ENST00000489072 NPIPB6E9PJ23 425 aa17.71■□□□□ 0.43
HMGN1-217ENST00000489072 M0R3E3 92 aa17.71■□□□□ 0.43
HMGN1-217ENST00000489072 CT45A10P0DMU9 189 aa17.71■□□□□ 0.43
HMGN1-217ENST00000489072 TAS2R60P59551 318 aa17.71■□□□□ 0.43
HMGN1-217ENST00000489072 ATP5SQ99766 215 aa17.71■□□□□ 0.43
HMGN1-217ENST00000489072 LYRM9A8MSI8 78 aa17.7■□□□□ 0.42
HMGN1-217ENST00000489072 PET100P0DJ07 73 aa17.7■□□□□ 0.42
HMGN1-217ENST00000489072 GFI1BQ5VTD9 330 aa17.7■□□□□ 0.42
HMGN1-217ENST00000489072 BLNKQ8WV28 456 aa17.7■□□□□ 0.42
HMGN1-217ENST00000489072 MBD2Q9UBB5 411 aa17.7■□□□□ 0.42
HMGN1-217ENST00000489072 ALG5Q9Y673 324 aa17.7■□□□□ 0.42
HMGN1-217ENST00000489072 HTN1P15515 57 aa17.69■□□□□ 0.42
HMGN1-217ENST00000489072 RPL12P30050 165 aaKnown RBP17.69■□□□□ 0.42
HMGN1-217ENST00000489072 PDE6HQ13956 83 aa17.69■□□□□ 0.42
HMGN1-217ENST00000489072 FCN2Q15485 313 aa17.69■□□□□ 0.42
HMGN1-217ENST00000489072 MRPL53Q96EL3 112 aaKnown RBP17.69■□□□□ 0.42
HMGN1-217ENST00000489072 FAM210BQ96KR6 192 aa17.69■□□□□ 0.42
HMGN1-217ENST00000489072 KCNIP2Q9NS61 270 aa17.69■□□□□ 0.42
HMGN1-217ENST00000489072 TIMM9Q9Y5J7 89 aa17.69■□□□□ 0.42
HMGN1-217ENST00000489072 EXOC3-AS1Q8N2X6 119 aa17.68■□□□□ 0.42
HMGN1-217ENST00000489072 ODF3Q96PU9 254 aa17.68■□□□□ 0.42
HMGN1-217ENST00000489072 SMIM3Q9BZL3 60 aa17.68■□□□□ 0.42
HMGN1-217ENST00000489072 H7BYZ3 331 aa17.67■□□□□ 0.42
HMGN1-217ENST00000489072 ERCC8Q13216 396 aa17.67■□□□□ 0.42
HMGN1-217ENST00000489072 C20orf144Q9BQM9 153 aa17.67■□□□□ 0.42
HMGN1-217ENST00000489072 C17orf112F2Z3M2 114 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 J3KRW8 73 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 P0DMU3 169 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 FAM231AP0DMU4 169 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 FAM231CP0DMU5 169 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 DEFB130BP0DP73 79 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 DEFB130AP0DP74 79 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 RNASE8Q8TDE3 154 aaKnown RBP17.66■□□□□ 0.42
HMGN1-217ENST00000489072 C16orf74Q96GX8 76 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 MRPL32Q9BYC8 188 aaKnown RBP17.66■□□□□ 0.42
HMGN1-217ENST00000489072 FUT9Q9Y231 359 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 PRELID1Q9Y255 219 aa17.66■□□□□ 0.42
HMGN1-217ENST00000489072 LEPP41159 167 aa17.65■□□□□ 0.42
HMGN1-217ENST00000489072 TMEM88Q6PEY1 159 aa17.65■□□□□ 0.42
HMGN1-217ENST00000489072 POM121L12Q8N7R1 296 aa17.65■□□□□ 0.42
HMGN1-217ENST00000489072 FXYD5Q96DB9 178 aa17.65■□□□□ 0.42
HMGN1-217ENST00000489072 OR51M1Q9H341 326 aa17.65■□□□□ 0.42
HMGN1-217ENST00000489072 WFDC1Q9HC57 220 aa17.65■□□□□ 0.42
HMGN1-217ENST00000489072 PTTG1O95997 202 aa17.64■□□□□ 0.41
HMGN1-217ENST00000489072 OR10J4P0C629 311 aa17.64■□□□□ 0.41
HMGN1-217ENST00000489072 NBEAP1P0C6P0 100 aa17.64■□□□□ 0.41
HMGN1-217ENST00000489072 ICAM4Q14773 271 aa17.64■□□□□ 0.41
HMGN1-217ENST00000489072 TMEM263Q8WUH6 116 aaKnown RBP17.64■□□□□ 0.41
HMGN1-217ENST00000489072 PAXXQ9BUH6 204 aa17.64■□□□□ 0.41
HMGN1-217ENST00000489072 FFAR4Q5NUL3 377 aa17.63■□□□□ 0.41
HMGN1-217ENST00000489072 ZNF493Q6ZR52 646 aa17.63■□□□□ 0.41
HMGN1-217ENST00000489072 ZNF503Q96F45 646 aa17.63■□□□□ 0.41
HMGN1-217ENST00000489072 AGPAT4-IT1Q9H0P7 198 aa17.63■□□□□ 0.41
HMGN1-217ENST00000489072 AAMDCQ9H7C9 122 aa17.63■□□□□ 0.41
HMGN1-217ENST00000489072 TRAV12-3A0A0B4J271 114 aa17.62■□□□□ 0.41
HMGN1-217ENST00000489072 IFNA5P01569 189 aa17.62■□□□□ 0.41
HMGN1-217ENST00000489072 RNF141Q8WVD5 230 aa17.62■□□□□ 0.41
HMGN1-217ENST00000489072 PHYHIPLQ96FC7 376 aa17.62■□□□□ 0.41
HMGN1-217ENST00000489072 FAM19A4Q96LR4 140 aa17.62■□□□□ 0.41
HMGN1-217ENST00000489072 NOP10Q9NPE3 64 aaKnown RBP17.62■□□□□ 0.41
HMGN1-217ENST00000489072 TIMM8BQ9Y5J9 83 aaPredicted RBP17.62■□□□□ 0.41
HMGN1-217ENST00000489072 FAM122CQ6P4D5 195 aa17.61■□□□□ 0.41
HMGN1-217ENST00000489072 SCGB1C1Q8TD33 95 aa17.61■□□□□ 0.41
HMGN1-217ENST00000489072 IGKV2-40A0A087WW87 121 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-217ENST00000489072 IGKV2D-40P01614 121 aaPredicted RBP17.6■□□□□ 0.41
HMGN1-217ENST00000489072 LINC00477Q96M19 166 aa17.6■□□□□ 0.41
HMGN1-217ENST00000489072 NACAE9PAV3 2078 aa17.6■□□□□ 0.41
HMGN1-217ENST00000489072 HECTD4Q9Y4D8 3996 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms