RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 NOXA1Q86UR1 476 aa5.26□□□□□ -1.57
XRN1-212ENST00000486211 PCNPQ8WW12 178 aaKnown RBP5.26□□□□□ -1.57
XRN1-212ENST00000486211 DPH3P1Q9H4G8 78 aa5.26□□□□□ -1.57
XRN1-212ENST00000486211 NDUFB11Q9NX14 153 aa5.26□□□□□ -1.57
XRN1-212ENST00000486211 TMEM56-RWDD3S4R434 201 aa5.26□□□□□ -1.57
XRN1-212ENST00000486211 TRGV4A0A0C4DH28 118 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 C3orf85A0A1B0GTC6 90 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 C9JCJ5 164 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 H3BRN7 92 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 SFTA3P0C7M3 94 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 CT45A10P0DMU9 189 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 GPX4P36969 197 aaPredicted RBP5.25□□□□□ -1.57
XRN1-212ENST00000486211 TRIM16LQ309B1 348 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 SP6Q3SY56 376 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 IBA57Q5T440 356 aaKnown RBP5.25□□□□□ -1.57
XRN1-212ENST00000486211 FAM219AQ8IW50 185 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 ZBTB8BQ8NAP8 495 aaPredicted RBP5.25□□□□□ -1.57
XRN1-212ENST00000486211 HSD17B11Q8NBQ5 300 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 ZNF479Q96JC4 524 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 ODF3Q96PU9 254 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 SLC25A31Q9H0C2 315 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 DUSP21Q9H596 190 aa5.25□□□□□ -1.57
XRN1-212ENST00000486211 FSIP2Q5CZC0 6907 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 TRAV8-6A0A0B4J262 113 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 A0A0D9SG52 128 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 GABARAPH6UMI1 98 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 GABARAPO95166 117 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 CFDP00746 253 aaPredicted RBP5.24□□□□□ -1.57
XRN1-212ENST00000486211 RPL7P18124 248 aaKnown RBP5.24□□□□□ -1.57
XRN1-212ENST00000486211 ORM2P19652 201 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 HLA-DMAP28067 261 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 PIGPP57054 158 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 TSPAN5P62079 268 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 MEF2DQ14814 521 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 CT83Q5H943 113 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 GGNBP1Q5YKI7 109 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 STEAP1BQ6NZ63 245 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 EIF4E3Q8N5X7 224 aaKnown RBP5.24□□□□□ -1.57
XRN1-212ENST00000486211 PACRGLQ8N7B6 248 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 LHFPL5Q8TAF8 219 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 SLC35E1Q96K37 410 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 SHANK2-AS3Q9BTD1 123 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 TP53TG3Q9ULZ0 132 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 U3KQ87 197 aa5.24□□□□□ -1.57
XRN1-212ENST00000486211 TRAV8-3A0A0A6YYJ7 113 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 MRPS12O15235 138 aaKnown RBP5.23□□□□□ -1.57
XRN1-212ENST00000486211 ATP5HO75947 161 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 CLEC2LP0C7M8 214 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 LEPP41159 167 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 PPT1P50897 306 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 OR10J3Q5JRS4 329 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 SH2D6Q7Z4S9 175 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 LGI3Q8N145 548 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 OR10G4Q8NGN3 311 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 ATP6V0E2Q8NHE4 81 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 RNASE11Q8TAA1 199 aaKnown RBP5.23□□□□□ -1.57
XRN1-212ENST00000486211 ZNF486Q96H40 463 aaPredicted RBP5.23□□□□□ -1.57
XRN1-212ENST00000486211 TMEM147Q9BVK8 224 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 ZNF331Q9NQX6 463 aaPredicted RBP5.23□□□□□ -1.57
XRN1-212ENST00000486211 SCN3BQ9NY72 215 aa5.23□□□□□ -1.57
XRN1-212ENST00000486211 C7orf71A4D174 169 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 KLLNB2CW77 178 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 RGS10O43665 173 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 CDS2O95674 445 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 SLC25A5P05141 298 aaKnown RBP5.22□□□□□ -1.57
XRN1-212ENST00000486211 PGAM2P15259 253 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 RCVRNP35243 200 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 WDR73Q6P4I2 378 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 C10orf67Q8IYJ2 551 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 C8orf4Q9NR00 106 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 TXNL4BQ9NX01 149 aaKnown RBP5.22□□□□□ -1.57
XRN1-212ENST00000486211 COX11Q9Y6N1 276 aa5.22□□□□□ -1.57
XRN1-212ENST00000486211 CXCL2P19875 107 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 BTN1A1Q13410 526 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 GPR107Q5VW38 600 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 PRSS48Q7RTY5 328 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 DAZ4Q86SG3 579 aaKnown RBP5.21□□□□□ -1.58
XRN1-212ENST00000486211 LHFPL1Q86WI0 220 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 NHLRC2Q8NBF2 726 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 BPIFCQ8NFQ6 507 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 OR10P1Q8NGE3 313 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 LRRC20Q8TCA0 184 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 DTD1Q8TEA8 209 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 GLYATL2Q8WU03 294 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 DNAJC30Q96LL9 226 aa5.21□□□□□ -1.58
XRN1-212ENST00000486211 DAZ3Q9NR90 486 aaKnown RBP5.21□□□□□ -1.58
XRN1-212ENST00000486211 PMS2P5A8MQ11 134 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 SLC17A3O00476 420 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 S100A7P31151 101 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 SDC2P34741 201 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 ATP5IP56385 69 aaPredicted RBP5.2□□□□□ -1.58
XRN1-212ENST00000486211 CIRBPQ14011 172 aaKnown RBP5.2□□□□□ -1.58
XRN1-212ENST00000486211 FFAR4Q5NUL3 377 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 Q6ZQT7 251 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 SELENOHQ8IZQ5 122 aaKnown RBP5.2□□□□□ -1.58
XRN1-212ENST00000486211 OR1S1Q8NH92 325 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 GPX8Q8TED1 209 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 FAM19A4Q96LR4 140 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 TMEM222Q9H0R3 208 aa5.2□□□□□ -1.58
XRN1-212ENST00000486211 RBKSQ9H477 322 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 414.1 ms