RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 RGS21Q2M5E4 152 aa13.08□□□□□ -0.32
PRPF40A-209ENST00000486100 OR5AC2Q9NZP5 309 aa13.08□□□□□ -0.32
PRPF40A-209ENST00000486100 DNAH10Q8IVF4 4471 aa13.08□□□□□ -0.32
PRPF40A-209ENST00000486100 LYRM9A8MSI8 78 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 PRAC2D3DTV9 90 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 H0YIZ8 118 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 ZNF253O75346 499 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 P0DMU3 169 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 FAM231AP0DMU4 169 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 FAM231CP0DMU5 169 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 AZU1P20160 251 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 TAS2R60P59551 318 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 LRRC37A5PQ49AS3 106 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 OR5C1Q8NGR4 320 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 OR10J6PQ8NGY7 276 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 NPCDR1Q9BY65 106 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 ZNF586Q9NXT0 402 aa13.07□□□□□ -0.32
PRPF40A-209ENST00000486100 HTN3P15516 51 aa13.06□□□□□ -0.32
PRPF40A-209ENST00000486100 POM121L12Q8N7R1 296 aa13.06□□□□□ -0.32
PRPF40A-209ENST00000486100 TMEM14CQ9P0S9 112 aa13.06□□□□□ -0.32
PRPF40A-209ENST00000486100 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
PRPF40A-209ENST00000486100 PLAC8L1A1L4L8 177 aa13.05□□□□□ -0.32
PRPF40A-209ENST00000486100 H2BFSP57053 126 aa13.05□□□□□ -0.32
PRPF40A-209ENST00000486100 THAP6Q8TBB0 222 aa13.05□□□□□ -0.32
PRPF40A-209ENST00000486100 C20orf144Q9BQM9 153 aa13.05□□□□□ -0.32
PRPF40A-209ENST00000486100 HIST1H1EP10412 219 aaKnown RBP13.04□□□□□ -0.32
PRPF40A-209ENST00000486100 GCSAMLQ5JQS6 135 aa13.04□□□□□ -0.32
PRPF40A-209ENST00000486100 PPP1R1CQ8WVI7 109 aa13.04□□□□□ -0.32
PRPF40A-209ENST00000486100 DNAH6Q9C0G6 4158 aa13.04□□□□□ -0.32
PRPF40A-209ENST00000486100 H7BYZ3 331 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 SSNA1O43805 119 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 HTN1P15515 57 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 CLINT1Q14677 625 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 KIR3DS1Q14943 382 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 PARD6GQ9BYG4 376 aaPredicted RBP13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 WDR61Q9GZS3 305 aaKnown RBP13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 TIMM9Q9Y5J7 89 aa13.03□□□□□ -0.32
PRPF40A-209ENST00000486100 NPIPB6E9PJ23 425 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 NDUFB4O95168 129 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 CT45A10P0DMU9 189 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 DEFB130BP0DP73 79 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 DEFB130AP0DP74 79 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 PDE6HQ13956 83 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 FCN2Q15485 313 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 ZNF493Q6ZR52 646 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 ODF3Q96PU9 254 aa13.02□□□□□ -0.33
PRPF40A-209ENST00000486100 FRAS1Q86XX4 4008 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 MPC2O95563 127 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 PYYP10082 97 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 GFI1BQ5VTD9 330 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 TMEM88Q6PEY1 159 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 SLC25A2Q9BXI2 301 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 KCNIP2Q9NS61 270 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 PRELID1Q9Y255 219 aa13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 TIMM8BQ9Y5J9 83 aaPredicted RBP13.01□□□□□ -0.33
PRPF40A-209ENST00000486100 C17orf112F2Z3M2 114 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 M0R3E3 92 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 PET100P0DJ07 73 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 LEPP41159 167 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 MIR17HGQ75NE6 70 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 RNASE8Q8TDE3 154 aaKnown RBP13□□□□□ -0.33
PRPF40A-209ENST00000486100 TMEM263Q8WUH6 116 aaKnown RBP13□□□□□ -0.33
PRPF40A-209ENST00000486100 BLNKQ8WV28 456 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 FAM167A-AS1Q96KT0 104 aa13□□□□□ -0.33
PRPF40A-209ENST00000486100 CBY3A6NI87 242 aa12.99□□□□□ -0.33
PRPF40A-209ENST00000486100 CCDC28AQ8IWP9 274 aa12.99□□□□□ -0.33
PRPF40A-209ENST00000486100 ATP5SQ99766 215 aa12.99□□□□□ -0.33
PRPF40A-209ENST00000486100 OR51M1Q9H341 326 aa12.99□□□□□ -0.33
PRPF40A-209ENST00000486100 HSPB11Q9Y547 144 aa12.99□□□□□ -0.33
PRPF40A-209ENST00000486100 NBEAP1P0C6P0 100 aa12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 RNF212Q495C1 297 aa12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 EXOC3-AS1Q8N2X6 119 aa12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 C15orf53Q8NAA6 179 aa12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 LINC00477Q96M19 166 aa12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 MRPL32Q9BYC8 188 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 AAMDCQ9H7C9 122 aa12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 NOP10Q9NPE3 64 aaKnown RBP12.98□□□□□ -0.33
PRPF40A-209ENST00000486100 J3KRW8 73 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 ATP5G1P05496 136 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 RPL12P30050 165 aaKnown RBP12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 ATP5G3P48201 142 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 ERCC8Q13216 396 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 UBE2DNLQ8IWF7 75 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 AGPAT4-IT1Q9H0P7 198 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 FUT9Q9Y231 359 aa12.97□□□□□ -0.33
PRPF40A-209ENST00000486100 TRAV12-3A0A0B4J271 114 aa12.96□□□□□ -0.33
PRPF40A-209ENST00000486100 F5H768 121 aa12.96□□□□□ -0.33
PRPF40A-209ENST00000486100 SLC25A5P05141 298 aaKnown RBP12.96□□□□□ -0.33
PRPF40A-209ENST00000486100 ICAM4Q14773 271 aa12.96□□□□□ -0.33
PRPF40A-209ENST00000486100 PAXXQ9BUH6 204 aa12.96□□□□□ -0.33
PRPF40A-209ENST00000486100 IFNA5P01569 189 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 LGALS9BQ3B8N2 356 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 SCGB1C1Q8TD33 95 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 RNF141Q8WVD5 230 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 FXYD5Q96DB9 178 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 FAM19A4Q96LR4 140 aa12.95□□□□□ -0.34
PRPF40A-209ENST00000486100 PYGO2Q9BRQ0 406 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms