RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 SUMO1P63165 101 aaKnown RBP11.72□□□□□ -0.53
APOE-205ENST00000485628 PSMG4Q5JS54 123 aa11.72□□□□□ -0.53
APOE-205ENST00000485628 CLUHP3Q96NS8 147 aa11.72□□□□□ -0.53
APOE-205ENST00000485628 A8MZ25 164 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 OR11H12B2RN74 326 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 PRAC2D3DTV9 90 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 TAGLN2P37802 199 aaKnown RBP11.71□□□□□ -0.53
APOE-205ENST00000485628 CD81P60033 236 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 UBE2G2P60604 165 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 FAM210AQ96ND0 272 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 PRR25Q96S07 402 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 TXNDC17Q9BRA2 123 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 SAV1Q9H4B6 383 aaPredicted RBP11.71□□□□□ -0.53
APOE-205ENST00000485628 AAMDCQ9H7C9 122 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 GNG13Q9P2W3 67 aa11.71□□□□□ -0.53
APOE-205ENST00000485628 A0A0J9YX75 114 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 LOC102723971A0A1B0GUV8 181 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 DIRC3C9JPN6 131 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 BCL2P10415 239 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 DEFB1P60022 68 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 ZNF124Q15973 351 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 GDF5OSQ5U4N7 250 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 FOXI2Q6ZQN5 318 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 GTSCR1Q86UQ5 136 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 APRG1Q8IVJ8 170 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 IQCF2Q8IXL9 164 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 C5orf17Q8NAS9 161 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 RXFP4Q8TDU9 374 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 RPUSD4Q96CM3 377 aaKnown RBP11.7□□□□□ -0.54
APOE-205ENST00000485628 LINC00052Q96N35 136 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 TCEAL7Q9BRU2 100 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 WFDC10AQ9H1F0 79 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 MED9Q9NWA0 146 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 PPP1R14DQ9NXH3 145 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 EPDR1Q9UM22 224 aa11.7□□□□□ -0.54
APOE-205ENST00000485628 RBAKDNA6NC62 111 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 H3BMM0 161 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 HLA-DRB4P13762 266 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 ATP5G3P48201 142 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 LINC00322Q6ZN03 302 aaPredicted RBP11.69□□□□□ -0.54
APOE-205ENST00000485628 C9orf47Q6ZRZ4 202 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 OR8A1Q8NGG7 326 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 RARRES2Q99969 163 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 VAX2Q9UIW0 290 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 HLA-DRB4X5D2U9 266 aa11.69□□□□□ -0.54
APOE-205ENST00000485628 RBFOX3A6NFN3 312 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 F6UB75 175 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 TCRAP04437 139 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 SLC25A5P05141 298 aaKnown RBP11.68□□□□□ -0.54
APOE-205ENST00000485628 RAB14P61106 215 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 AMTNQ6UX39 209 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 ZNF738Q8NE65 137 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 C11orf52Q96A22 123 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 KLF12Q9Y4X4 402 aa11.68□□□□□ -0.54
APOE-205ENST00000485628 C11orf94C9JXX5 98 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 NPIPB6E9PJ23 425 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 IGLV2-11P01706 119 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 MEF2BQ02080 365 aaPredicted RBP11.67□□□□□ -0.54
APOE-205ENST00000485628 CST9LP1Q5W188 147 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
APOE-205ENST00000485628 DEFB125Q8N687 156 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 C2CD4CQ8TF44 421 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 HIST1H2BAQ96A08 127 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 FAM19A4Q96LR4 140 aa11.67□□□□□ -0.54
APOE-205ENST00000485628 AURKAIP1Q9NWT8 199 aaPredicted RBP11.67□□□□□ -0.54
APOE-205ENST00000485628 SERTM2A0A1B0GWG4 89 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 KNCNA6PVL3 124 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 IFNA1P01562 189 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 GNG5P63218 68 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 HAGHQ16775 308 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 ATG101Q9BSB4 218 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 AGPAT4-IT1Q9H0P7 198 aa11.66□□□□□ -0.54
APOE-205ENST00000485628 LINC00862A6NCI5 91 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 RBMY1BA6NDE4 496 aaKnown RBP11.65□□□□□ -0.54
APOE-205ENST00000485628 RBMY1EA6NEQ0 496 aaKnown RBP11.65□□□□□ -0.54
APOE-205ENST00000485628 K7EIL1 84 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 RBMY1DP0C7P1 496 aaKnown RBP11.65□□□□□ -0.54
APOE-205ENST00000485628 PRB4P10163 310 aaPredicted RBP11.65□□□□□ -0.54
APOE-205ENST00000485628 CSN1S1P47710 185 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 CNN1P51911 297 aaKnown RBP11.65□□□□□ -0.54
APOE-205ENST00000485628 CMTM2Q8TAZ6 248 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 LINC00477Q96M19 166 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 VGLL1Q99990 258 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 SMDT1Q9H4I9 107 aa11.65□□□□□ -0.54
APOE-205ENST00000485628 IGKV2-40A0A087WW87 121 aaPredicted RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 TRBV6-1A0A0K0K1D8 114 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 RAB19A4D1S5 217 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 C9JQL5 133 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 PEX7O00628 323 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 PDE6DO43924 150 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 DUSP14O95147 198 aaKnown RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 IGKV2D-40P01614 121 aaPredicted RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 GIG44P09565 113 aaPredicted RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 ZNF705DP0CH99 300 aaPredicted RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 ZNF705BP0CI00 300 aaPredicted RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 IGHV4-30-4P0DP06 118 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 SRSF3P84103 164 aaKnown RBP11.64□□□□□ -0.55
APOE-205ENST00000485628 ACTL10Q5JWF8 245 aa11.64□□□□□ -0.55
APOE-205ENST00000485628 GOLT1AQ6ZVE7 132 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms