RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GUK1Q16774 197 aa9.21□□□□□ -0.94
HDAC1-209ENST00000484305 FAM222AQ5U5X8 452 aa9.21□□□□□ -0.94
HDAC1-209ENST00000484305 RPP25LQ8N5L8 163 aaKnown RBP9.21□□□□□ -0.94
HDAC1-209ENST00000484305 YTHDF2Q9Y5A9 579 aaKnown RBP9.21□□□□□ -0.94
HDAC1-209ENST00000484305 KMT2AQ03164 3969 aa9.2□□□□□ -0.94
HDAC1-209ENST00000484305 PYYP10082 97 aa9.2□□□□□ -0.94
HDAC1-209ENST00000484305 WDR61Q9GZS3 305 aaKnown RBP9.2□□□□□ -0.94
HDAC1-209ENST00000484305 TMEM14CQ9P0S9 112 aa9.2□□□□□ -0.94
HDAC1-209ENST00000484305 HSPB11Q9Y547 144 aa9.2□□□□□ -0.94
HDAC1-209ENST00000484305 ALG5Q9Y673 324 aa9.2□□□□□ -0.94
HDAC1-209ENST00000484305 EPPK1P58107 5090 aaKnown RBP9.19□□□□□ -0.94
HDAC1-209ENST00000484305 TRBV19A0A075B6N1 114 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 ZNF253O75346 499 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 NDUFB4O95168 129 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 PET100P0DJ07 73 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 AZU1P20160 251 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 KIR3DS1Q14943 382 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 OR10J6PQ8NGY7 276 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 FAM167A-AS1Q96KT0 104 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 LINC01587Q99440 93 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 ATP5SQ99766 215 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 NIPSNAP3BQ9BS92 247 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 SLC25A2Q9BXI2 301 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 PARD6GQ9BYG4 376 aaPredicted RBP9.19□□□□□ -0.94
HDAC1-209ENST00000484305 MBD2Q9UBB5 411 aa9.19□□□□□ -0.94
HDAC1-209ENST00000484305 TEX48A0A1B0GUV7 120 aa9.18□□□□□ -0.94
HDAC1-209ENST00000484305 PTTG1O95997 202 aa9.18□□□□□ -0.94
HDAC1-209ENST00000484305 HIST1H1EP10412 219 aaKnown RBP9.18□□□□□ -0.94
HDAC1-209ENST00000484305 RPL12P30050 165 aaKnown RBP9.18□□□□□ -0.94
HDAC1-209ENST00000484305 CDKN1BP46527 198 aa9.18□□□□□ -0.94
HDAC1-209ENST00000484305 MIR17HGQ75NE6 70 aa9.18□□□□□ -0.94
HDAC1-209ENST00000484305 BLNKQ8WV28 456 aa9.18□□□□□ -0.94
HDAC1-209ENST00000484305 SMIM3Q9BZL3 60 aa9.18□□□□□ -0.94
HDAC1-209ENST00000484305 PLAC8L1A1L4L8 177 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 C17orf112F2Z3M2 114 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 M0R3E3 92 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 CT45A10P0DMU9 189 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 OXA1LQ15070 435 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 KCNIP2Q9NS61 270 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 TIMM9Q9Y5J7 89 aa9.17□□□□□ -0.94
HDAC1-209ENST00000484305 NPIPB6E9PJ23 425 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 HTN1P15515 57 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 TSPOP30536 169 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 TAS2R60P59551 318 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 DAD1P61803 113 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 PDE6HQ13956 83 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 TMEM256Q8N2U0 113 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 EXOC3-AS1Q8N2X6 119 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 WFDC1Q9HC57 220 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 FUT9Q9Y231 359 aa9.16□□□□□ -0.94
HDAC1-209ENST00000484305 J3KRW8 73 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 IFNA5P01569 189 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 OR10J4P0C629 311 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 NBEAP1P0C6P0 100 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 HTN3P15516 51 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 ERCC8Q13216 396 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 FCN2Q15485 313 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 FFAR4Q5NUL3 377 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 GFI1BQ5VTD9 330 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 SCGB1C1Q8TD33 95 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 MRPL53Q96EL3 112 aaKnown RBP9.15□□□□□ -0.94
HDAC1-209ENST00000484305 NDUFAF3Q9BU61 184 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 MRPL32Q9BYC8 188 aaKnown RBP9.15□□□□□ -0.94
HDAC1-209ENST00000484305 OR51M1Q9H341 326 aa9.15□□□□□ -0.94
HDAC1-209ENST00000484305 LYRM9A8MSI8 78 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 ICAM4Q14773 271 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 RNF141Q8WVD5 230 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 FXYD5Q96DB9 178 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 ZNF503Q96F45 646 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 C20orf144Q9BQM9 153 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 PAXXQ9BUH6 204 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 MED28Q9H204 178 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 AAMDCQ9H7C9 122 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 PRELID1Q9Y255 219 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 VPS13DQ5THJ4 4388 aa9.14□□□□□ -0.95
HDAC1-209ENST00000484305 TRAV12-3A0A0B4J271 114 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 H7BYZ3 331 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 OR7C2O60412 319 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 DEFB130BP0DP73 79 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 DEFB130AP0DP74 79 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 LEPP41159 167 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 FAM122CQ6P4D5 195 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 RNASE8Q8TDE3 154 aaKnown RBP9.13□□□□□ -0.95
HDAC1-209ENST00000484305 C16orf74Q96GX8 76 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 ODF3Q96PU9 254 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 AGPAT4-IT1Q9H0P7 198 aa9.13□□□□□ -0.95
HDAC1-209ENST00000484305 EIF3GO75821 320 aaKnown RBP eCLIP9.12□□□□□ -0.95
HDAC1-209ENST00000484305 Q5BKY6 102 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 ZNF493Q6ZR52 646 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 TMEM263Q8WUH6 116 aaKnown RBP9.12□□□□□ -0.95
HDAC1-209ENST00000484305 PHYHIPLQ96FC7 376 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 FAM210BQ96KR6 192 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 FAM19A4Q96LR4 140 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 LINC00477Q96M19 166 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 VGLL1Q99990 258 aa9.12□□□□□ -0.95
HDAC1-209ENST00000484305 IGKV2-40A0A087WW87 121 aaPredicted RBP9.11□□□□□ -0.95
HDAC1-209ENST00000484305 IGKV2D-40P01614 121 aaPredicted RBP9.11□□□□□ -0.95
HDAC1-209ENST00000484305 P0DMU3 169 aa9.11□□□□□ -0.95
HDAC1-209ENST00000484305 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
HDAC1-209ENST00000484305 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms