RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 FAM122CQ6P4D5 195 aa15.2■□□□□ 0.02
SEC13-217ENST00000482647 KCNRGQ8N5I3 272 aa15.2■□□□□ 0.02
SEC13-217ENST00000482647 OR11H4Q8NGC9 324 aa15.2■□□□□ 0.02
SEC13-217ENST00000482647 OR10J6PQ8NGY7 276 aa15.2■□□□□ 0.02
SEC13-217ENST00000482647 AMBPP02760 352 aa15.19■□□□□ 0.02
SEC13-217ENST00000482647 UBE2L3P68036 154 aaKnown RBP15.19■□□□□ 0.02
SEC13-217ENST00000482647 ZNF503Q96F45 646 aa15.19■□□□□ 0.02
SEC13-217ENST00000482647 A0A0D9SG52 128 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 PRAC2D3DTV9 90 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 PRB4P10163 310 aaPredicted RBP15.18■□□□□ 0.02
SEC13-217ENST00000482647 MIFP14174 115 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 PQLC2Q6ZP29 291 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 EXOC3-AS1Q8N2X6 119 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 RPP25LQ8N5L8 163 aaKnown RBP15.18■□□□□ 0.02
SEC13-217ENST00000482647 ST6GAL2Q96JF0 529 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 ARPC5LQ9BPX5 153 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 CYTL1Q9NRR1 136 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 X6R8D5 127 aa15.18■□□□□ 0.02
SEC13-217ENST00000482647 CDC34P49427 236 aaPredicted RBP15.17■□□□□ 0.02
SEC13-217ENST00000482647 ICAM4Q14773 271 aa15.17■□□□□ 0.02
SEC13-217ENST00000482647 C11orf68Q9H3H3 251 aaKnown RBP15.17■□□□□ 0.02
SEC13-217ENST00000482647 GOLT1BQ9Y3E0 138 aa15.17■□□□□ 0.02
SEC13-217ENST00000482647 BOLA2-SMG1P6H3BVE0 249 aa15.16■□□□□ 0.02
SEC13-217ENST00000482647 M0R3E3 92 aa15.16■□□□□ 0.02
SEC13-217ENST00000482647 EIF3GO75821 320 aaKnown RBP eCLIP15.16■□□□□ 0.02
SEC13-217ENST00000482647 RANP62826 216 aaKnown RBP15.16■□□□□ 0.02
SEC13-217ENST00000482647 SPINK13Q1W4C9 94 aa15.16■□□□□ 0.02
SEC13-217ENST00000482647 ZNF705AQ6ZN79 300 aaPredicted RBP15.16■□□□□ 0.02
SEC13-217ENST00000482647 TCTE3Q8IZS6 198 aa15.16■□□□□ 0.02
SEC13-217ENST00000482647 LYPD1Q8N2G4 141 aa15.16■□□□□ 0.02
SEC13-217ENST00000482647 IGF2BP2-AS1Q96M15 143 aa15.16■□□□□ 0.02
SEC13-217ENST00000482647 ACTR3CQ9C0K3 210 aaPredicted RBP15.16■□□□□ 0.02
SEC13-217ENST00000482647 KANTRA0A1W2PQU2 76 aa15.15■□□□□ 0.02
SEC13-217ENST00000482647 M0R2Z0 102 aa15.15■□□□□ 0.02
SEC13-217ENST00000482647 Q8NAQ8 132 aa15.15■□□□□ 0.02
SEC13-217ENST00000482647 RAB24Q969Q5 203 aa15.15■□□□□ 0.02
SEC13-217ENST00000482647 PHYHIPLQ96FC7 376 aa15.15■□□□□ 0.02
SEC13-217ENST00000482647 hCG_2014768A0A024R1R8 64 aa15.14■□□□□ 0.01
SEC13-217ENST00000482647 IGHV3OR16-12A0A075B7B8 117 aa15.14■□□□□ 0.01
SEC13-217ENST00000482647 IGHV4-28A0A0C4DH34 117 aa15.14■□□□□ 0.01
SEC13-217ENST00000482647 DEFB4AO15263 64 aa15.14■□□□□ 0.01
SEC13-217ENST00000482647 HMGB3O15347 200 aaKnown RBP15.14■□□□□ 0.01
SEC13-217ENST00000482647 INSP01308 110 aa15.14■□□□□ 0.01
SEC13-217ENST00000482647 NEU1Q99519 415 aa15.14■□□□□ 0.01
SEC13-217ENST00000482647 SMIM9A6NGZ8 99 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 NPIPB6E9PJ23 425 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 STAG3L2P0CL84 134 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 STAG3L3P0CL85 134 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 TSPOP30536 169 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 CASC10Q5T4H9 136 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 ZFAND6Q6FIF0 208 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 TMEM208Q9BTX3 173 aa15.13■□□□□ 0.01
SEC13-217ENST00000482647 CRXO43186 299 aaPredicted RBP15.12■□□□□ 0.01
SEC13-217ENST00000482647 BCL2L11O43521 198 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 PFDN1O60925 122 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 ARL14EPLP0DKL9 152 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 CDKN1BP46527 198 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 CSN1S1P47710 185 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 AKR1C8PQ5T2L2 129 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 AKAP14Q86UN6 197 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 C1orf158Q8N1D5 194 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 Q9H3A6 140 aa15.12■□□□□ 0.01
SEC13-217ENST00000482647 TRAV12-2A0A075B6T6 113 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 RBMY1A1P0DJD3 496 aaKnown RBP15.11■□□□□ 0.01
SEC13-217ENST00000482647 RBMY1CP0DJD4 496 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 CT45A10P0DMU9 189 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 RBMY1FQ15415 496 aaKnown RBP15.11■□□□□ 0.01
SEC13-217ENST00000482647 TMUB2Q71RG4 321 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 BAP18Q8IXM2 172 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 LINC00477Q96M19 166 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 ODF3Q96PU9 254 aa15.11■□□□□ 0.01
SEC13-217ENST00000482647 ZNF471Q9BX82 626 aaPredicted RBP15.11■□□□□ 0.01
SEC13-217ENST00000482647 CXorf1O96002 111 aa15.1■□□□□ 0.01
SEC13-217ENST00000482647 EIF5AP63241 154 aaKnown RBP15.1■□□□□ 0.01
SEC13-217ENST00000482647 FAM74A1Q5RGS3 127 aa15.1■□□□□ 0.01
SEC13-217ENST00000482647 C11orf45Q8TAV5 145 aa15.1■□□□□ 0.01
SEC13-217ENST00000482647 RXFP4Q8TDU9 374 aa15.1■□□□□ 0.01
SEC13-217ENST00000482647 OTORQ9NRC9 128 aa15.1■□□□□ 0.01
SEC13-217ENST00000482647 HBE1P02100 147 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 C1QBP02746 253 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 GCHFRP30047 84 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 LEPP41159 167 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 ERCC8Q13216 396 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 C9orf47Q6ZRZ4 202 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 AGPAT4-IT1Q9H0P7 198 aa15.09■□□□□ 0.01
SEC13-217ENST00000482647 STARD9Q9P2P6 4700 aa15.08■□□□□ 0.01
SEC13-217ENST00000482647 CTXND1A0A1B0GTU2 59 aa15.08■□□□□ 0
SEC13-217ENST00000482647 TMEM189A5PLL7 270 aa15.08■□□□□ 0
SEC13-217ENST00000482647 CXorf65A6NEN9 183 aa15.08■□□□□ 0
SEC13-217ENST00000482647 TMEM78Q5T7P6 136 aa15.08■□□□□ 0
SEC13-217ENST00000482647 TMEM256Q8N2U0 113 aa15.08■□□□□ 0
SEC13-217ENST00000482647 CMTM2Q8TAZ6 248 aa15.08■□□□□ 0
SEC13-217ENST00000482647 SUN5Q8TC36 379 aa15.08■□□□□ 0
SEC13-217ENST00000482647 HYLS1Q96M11 299 aa15.08■□□□□ 0
SEC13-217ENST00000482647 TMEM167BQ9NRX6 74 aa15.08■□□□□ 0
SEC13-217ENST00000482647 IGKV2-40A0A087WW87 121 aaPredicted RBP15.07■□□□□ 0
SEC13-217ENST00000482647 PGPA6NDG6 321 aa15.07■□□□□ 0
SEC13-217ENST00000482647 IGKV2D-40P01614 121 aaPredicted RBP15.07■□□□□ 0
SEC13-217ENST00000482647 SEC11BP0C7V7 166 aa15.07■□□□□ 0
SEC13-217ENST00000482647 RRN3P1Q2M238 152 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 187.4 ms