RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-233	ENST00000482563	CUL7	Q14999	1698 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	NAIP	Q13075	1403 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	FNDC10	F2Z333	226 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	CD2	P06729	351 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	HRES1	P13985	223 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	ZNF791	Q3KP31	576 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	ACBD7	Q8N6N7	88 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	MRPL57	Q9BQC6	102 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	TAS2R4	Q9NYW5	299 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	TP53TG3	Q9ULZ0	132 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	MYH13	Q9UKX3	1938 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	PTPRB	P23467	1997 aa		4.18	□□□□□ -1.74
RBM39-233	ENST00000482563	ARHGAP32	A7KAX9	2087 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	CUL9	Q8IWT3	2517 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	A2ML1	A8K2U0	1454 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	MYOM2	P54296	1465 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	ADGRB1	O14514	1584 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	TMEM218	A2RU14	115 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	ODF3B	A8MYP8	253 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	MGST1	P10620	155 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	PCBD1	P61457	104 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	HMGN2P46	Q86SG4	172 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	HIGD2A	Q9BW72	106 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	TPRKB	Q9Y3C4	175 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	ZNF609	O15014	1411 aa		4.17	□□□□□ -1.74
RBM39-233	ENST00000482563	IGLV2-18	A0A075B6J9	118 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	TRAV1-1	A0A0B4J248	108 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	TRAV40	A0A0B4J280	105 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563		A0A1W2PNM2	257 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563		M0R143	59 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	HOXB6	P17509	224 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	TMEM258	P61165	79 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	ZNF345	Q14585	488 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563		Q6ZUT4	128 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	C8orf59	Q8N0T1	100 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	OR5AS1	Q8N127	324 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	C10orf111	Q8N326	155 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	OTOS	Q8NHW6	89 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	CXCL16	Q9H2A7	254 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	ADAMTS9	Q9P2N4	1935 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	ABCC10	Q5T3U5	1492 aa		4.16	□□□□□ -1.74
RBM39-233	ENST00000482563	TRAV12-2	A0A075B6T6	113 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	TRAV30	A0A087WSZ9	112 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	GAS8-AS1	O95177	125 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	IFNA17	P01571	189 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	SAA1	P0DJI8	122 aa	Predicted RBP	4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	HIST1H1D	P16402	221 aa	Known RBP	4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	PKIA	P61925	76 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	ZNF826P	Q6ZT77	177 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	HYLS1	Q96M11	299 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	ANAPC11	Q9NYG5	84 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	QRICH2	Q9H0J4	1663 aa		4.15	□□□□□ -1.74
RBM39-233	ENST00000482563	PLXNA3	P51805	1871 aa		4.15	□□□□□ -1.75
RBM39-233	ENST00000482563	CDK6	Q00534	326 aa		4.15	□□□□□ -1.75
RBM39-233	ENST00000482563	ZNF90	Q03938	601 aa		4.15	□□□□□ -1.75
RBM39-233	ENST00000482563	CATR1	Q13166	79 aa		4.15	□□□□□ -1.75
RBM39-233	ENST00000482563	ZFYVE16	Q7Z3T8	1539 aa		4.15	□□□□□ -1.75
RBM39-233	ENST00000482563	PSMF1	Q92530	271 aa		4.15	□□□□□ -1.75
RBM39-233	ENST00000482563	LOC107986453	A0A1B0GWG9	222 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	PSCA	O43653	123 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	MIC13	Q5XKP0	118 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	ATOH7	Q8N100	152 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	KCNRG	Q8N5I3	272 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	SEC11C	Q9BY50	192 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	LY96	Q9Y6Y9	160 aa		4.14	□□□□□ -1.75
RBM39-233	ENST00000482563	PVALEF	A0A1B0GWK0	134 aa		4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	PMP2	P02689	132 aa		4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	LSM3	P62310	102 aa	Known RBP	4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	HSD52	Q0P140	79 aa		4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	CIRBP	Q14011	172 aa	Known RBP	4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	KRTAP11-1	Q8IUC1	163 aa		4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	C9orf163	Q8N9P6	203 aa		4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	AGPAT4-IT1	Q9H0P7	198 aa		4.13	□□□□□ -1.75
RBM39-233	ENST00000482563	TMSB15B	A0A087X1C1	80 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	hDV103S1	A0JD37	113 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	LYRM1	O43325	122 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	CRP	P02741	224 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	TPPP2	P59282	170 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	GKN2	Q86XP6	184 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	FAM19A2	Q8N3H0	131 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	OR5AK2	Q8NH90	309 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	IER3IP1	Q9Y5U9	82 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	MYH9	P35579	1960 aa	Known RBP	4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	MYH1	P12882	1939 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563		M0R233	179 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563		M0R2P5	195 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	LINC00471	Q8N535	108 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	LINC00301	Q8NCQ3	95 aa		4.12	□□□□□ -1.75
RBM39-233	ENST00000482563	ALPK3	Q96L96	1907 aa		4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	IBA57-AS1	B1ANH7	110 aa		4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	KLF7	O75840	302 aa	Predicted RBP	4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	TNF	P01375	233 aa		4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	TRAC	P01848	142 aa		4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	LSM10	Q969L4	123 aa	Known RBP	4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	STRC	Q7RTU9	1775 aa		4.11	□□□□□ -1.75
RBM39-233	ENST00000482563	SLIT3	O75094	1523 aa		4.1	□□□□□ -1.75
RBM39-233	ENST00000482563	MUC21	A0A0G2JKD1	596 aa		4.1	□□□□□ -1.75
RBM39-233	ENST00000482563	MUC21	A0A140T8X8	626 aa		4.1	□□□□□ -1.75
RBM39-233	ENST00000482563	HMSD	A8MTL9	139 aa		4.1	□□□□□ -1.75
RBM39-233	ENST00000482563	C17orf112	F2Z3M2	114 aa		4.1	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms