RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ZNF846Q147U1 533 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 MIC13Q5XKP0 118 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 C6orf223Q8N319 242 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 PLA2G10O15496 165 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 CST7O76096 145 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 CLINT1Q14677 625 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 NRARPQ7Z6K4 114 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 SAT2Q96F10 170 aaPredicted RBP13.13□□□□□ -0.31
ABCF3-214ENST00000480562 C20orf144Q9BQM9 153 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 KRTAP4-5Q9BYR2 181 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 DNAJC4Q9NNZ3 241 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 PXMP4Q9Y6I8 212 aa13.13□□□□□ -0.31
ABCF3-214ENST00000480562 FAM24AA6NFZ4 105 aa13.12□□□□□ -0.31
ABCF3-214ENST00000480562 CT45A10P0DMU9 189 aa13.12□□□□□ -0.31
ABCF3-214ENST00000480562 CAV2P51636 162 aa13.12□□□□□ -0.31
ABCF3-214ENST00000480562 CNPY1Q3B7I2 92 aa13.12□□□□□ -0.31
ABCF3-214ENST00000480562 SSX7Q7RTT5 188 aa13.12□□□□□ -0.31
ABCF3-214ENST00000480562 CCDC28AQ8IWP9 274 aa13.12□□□□□ -0.31
ABCF3-214ENST00000480562 TRAV6A0A075B6T7 132 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 TRAV26-1A0A087WT03 109 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 A0A0J9YY99 117 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 GAGE12BA1L429 117 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 GAGE7O76087 117 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 GAGE12FP0CL80 117 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 GAGE12GP0CL81 117 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 GAGE12IP0CL82 117 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 RAB31Q13636 194 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 Q6ZRG5 221 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 LINC00612Q8N6U2 182 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 GNPNAT1Q96EK6 184 aaPredicted RBP13.11□□□□□ -0.31
ABCF3-214ENST00000480562 SEC22CQ9BRL7 303 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 C11orf1Q9H5F2 150 aa13.11□□□□□ -0.31
ABCF3-214ENST00000480562 TRAV12-3A0A0B4J271 114 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 C5orf51A6NDU8 294 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 LYRM1O43325 122 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 HOXA5P20719 270 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 UQCC1Q9NVA1 299 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 ZNF586Q9NXT0 402 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 WDR83OSQ9Y284 106 aa13.1□□□□□ -0.31
ABCF3-214ENST00000480562 APOBP04114 4563 aaKnown RBP13.1□□□□□ -0.31
ABCF3-214ENST00000480562 NPIPB6E9PJ23 425 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 RLN2P04090 185 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 TCRBP04435 133 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 M6PRP20645 277 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 LEPP41159 167 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 OR1L4Q8NGR5 311 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 ZNF431Q8TF32 576 aaPredicted RBP13.09□□□□□ -0.31
ABCF3-214ENST00000480562 Q9H8V8 135 aa13.09□□□□□ -0.31
ABCF3-214ENST00000480562 UBE2L5PA0A1B0GUS4 154 aa13.08□□□□□ -0.32
ABCF3-214ENST00000480562 SNURFLB1AK76 121 aa13.08□□□□□ -0.32
ABCF3-214ENST00000480562 GUK1Q16774 197 aa13.08□□□□□ -0.32
ABCF3-214ENST00000480562 RXFP4Q8TDU9 374 aa13.08□□□□□ -0.32
ABCF3-214ENST00000480562 SLC39A9Q9NUM3 307 aa13.08□□□□□ -0.32
ABCF3-214ENST00000480562 M0R3E3 92 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 S100A10P60903 97 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 BAXQ07812 192 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 VWC2Q2TAL6 325 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 C12orf45Q8N5I9 185 aaPredicted RBP13.07□□□□□ -0.32
ABCF3-214ENST00000480562 C2orf50Q96LR7 162 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 ODF3Q96PU9 254 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 PFDN5Q99471 154 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 KRTAP1-5Q9BYS1 174 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 NUDT15Q9NV35 164 aa13.07□□□□□ -0.32
ABCF3-214ENST00000480562 IGSF23A1L1A6 192 aa13.06□□□□□ -0.32
ABCF3-214ENST00000480562 PVALBP20472 110 aaPredicted RBP13.06□□□□□ -0.32
ABCF3-214ENST00000480562 RPL29P47914 159 aaKnown RBP13.06□□□□□ -0.32
ABCF3-214ENST00000480562 ERCC8Q13216 396 aa13.06□□□□□ -0.32
ABCF3-214ENST00000480562 ESRGQ1W209 222 aa13.06□□□□□ -0.32
ABCF3-214ENST00000480562 Q6ZTI0 123 aa13.06□□□□□ -0.32
ABCF3-214ENST00000480562 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
ABCF3-214ENST00000480562 SULT1A1P50225 295 aa13.05□□□□□ -0.32
ABCF3-214ENST00000480562 TMEM252Q8N6L7 170 aa13.05□□□□□ -0.32
ABCF3-214ENST00000480562 ZNF503Q96F45 646 aa13.05□□□□□ -0.32
ABCF3-214ENST00000480562 PYGO2Q9BRQ0 406 aa13.05□□□□□ -0.32
ABCF3-214ENST00000480562 LYRM2Q9NU23 88 aaPredicted RBP13.05□□□□□ -0.32
ABCF3-214ENST00000480562 DNAH5Q8TE73 4624 aa13.05□□□□□ -0.32
ABCF3-214ENST00000480562 TRBV19A0A075B6N1 114 aa13.04□□□□□ -0.32
ABCF3-214ENST00000480562 ZNF253O75346 499 aa13.04□□□□□ -0.32
ABCF3-214ENST00000480562 FGF7P21781 194 aa13.04□□□□□ -0.32
ABCF3-214ENST00000480562 S100A11P31949 105 aa13.04□□□□□ -0.32
ABCF3-214ENST00000480562 RAB32Q13637 225 aa13.04□□□□□ -0.32
ABCF3-214ENST00000480562 GSN-AS1Q9NRJ2 163 aa13.04□□□□□ -0.32
ABCF3-214ENST00000480562 C7orf71A4D174 169 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 NDUFB4O95168 129 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 SLC25A5P05141 298 aaKnown RBP13.03□□□□□ -0.32
ABCF3-214ENST00000480562 H2AFB2P0C5Z0 115 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 PYYP10082 97 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 CD300CQ08708 224 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 DAZ2Q13117 558 aaKnown RBP13.03□□□□□ -0.32
ABCF3-214ENST00000480562 IL15RAQ13261 267 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 STX12Q86Y82 276 aa13.03□□□□□ -0.32
ABCF3-214ENST00000480562 MRPL53Q96EL3 112 aaKnown RBP13.03□□□□□ -0.32
ABCF3-214ENST00000480562 HIST1H1EP10412 219 aaKnown RBP13.02□□□□□ -0.33
ABCF3-214ENST00000480562 BTN1A1Q13410 526 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 TTC32Q5I0X7 151 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 GCSAMLQ5JQS6 135 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 SPATA12Q7Z6I5 190 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 EXOC3-AS1Q8N2X6 119 aa13.02□□□□□ -0.33
ABCF3-214ENST00000480562 BLNKQ8WV28 456 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms