RNA–Protein interactions for RNA: ENST00000478459.5

EPHB4-205, Transcript of EPH receptor B4, humanhuman

TSL 2

Gene EPHB4, Length 965 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-205ENST00000478459 PFDN5Q99471 154 aa13.53□□□□□ -0.24
EPHB4-205ENST00000478459 SSNA1O43805 119 aa13.52□□□□□ -0.25
EPHB4-205ENST00000478459 TMEM88Q6PEY1 159 aa13.52□□□□□ -0.25
EPHB4-205ENST00000478459 SAT2Q96F10 170 aaPredicted RBP13.52□□□□□ -0.25
EPHB4-205ENST00000478459 NPCDR1Q9BY65 106 aa13.52□□□□□ -0.25
EPHB4-205ENST00000478459 RNF24Q9Y225 148 aa13.52□□□□□ -0.25
EPHB4-205ENST00000478459 M0R3E3 92 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 RLN2P04090 185 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 CXCL2P19875 107 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 CDKN1BP46527 198 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 H2BFSP57053 126 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 ATP6V1FQ16864 119 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 UBE2DNLQ8IWF7 75 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 OR10J6PQ8NGY7 276 aa13.51□□□□□ -0.25
EPHB4-205ENST00000478459 IGLV2-18A0A075B6J9 118 aa13.5□□□□□ -0.25
EPHB4-205ENST00000478459 E5RGE8 158 aa13.5□□□□□ -0.25
EPHB4-205ENST00000478459 ERCC8Q13216 396 aa13.5□□□□□ -0.25
EPHB4-205ENST00000478459 MIR17HGQ75NE6 70 aa13.5□□□□□ -0.25
EPHB4-205ENST00000478459 SMIM3Q9BZL3 60 aa13.5□□□□□ -0.25
EPHB4-205ENST00000478459 NMES1Q9C002 83 aa13.5□□□□□ -0.25
EPHB4-205ENST00000478459 TEX48A0A1B0GUV7 120 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 PLAC8L1A1L4L8 177 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 PRAF2O60831 178 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 EIF3GO75821 320 aaKnown RBP eCLIP13.49□□□□□ -0.25
EPHB4-205ENST00000478459 CT45A10P0DMU9 189 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 GFI1BQ5VTD9 330 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 EXOC3-AS1Q8N2X6 119 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 PPP1R1CQ8WVI7 109 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 SLC25A31Q9H0C2 315 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 TIMM9Q9Y5J7 89 aa13.49□□□□□ -0.25
EPHB4-205ENST00000478459 TRAV12-3A0A0B4J271 114 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 P0DMU3 169 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 FAM231AP0DMU4 169 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 FAM231CP0DMU5 169 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 DEFA1P59665 94 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 DEFA3P59666 94 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 POM121L12Q8N7R1 296 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 MARVELD1Q9BSK0 173 aa13.48□□□□□ -0.25
EPHB4-205ENST00000478459 TRBV19A0A075B6N1 114 aa13.47□□□□□ -0.25
EPHB4-205ENST00000478459 F5H768 121 aa13.47□□□□□ -0.25
EPHB4-205ENST00000478459 NDUFB4O95168 129 aa13.47□□□□□ -0.25
EPHB4-205ENST00000478459 SLC25A2Q9BXI2 301 aa13.47□□□□□ -0.25
EPHB4-205ENST00000478459 NOP10Q9NPE3 64 aaKnown RBP13.47□□□□□ -0.25
EPHB4-205ENST00000478459 LYRM9A8MSI8 78 aa13.46□□□□□ -0.25
EPHB4-205ENST00000478459 OR10J4P0C629 311 aa13.46□□□□□ -0.25
EPHB4-205ENST00000478459 TAS2R60P59551 318 aa13.46□□□□□ -0.25
EPHB4-205ENST00000478459 GUK1Q16774 197 aa13.46□□□□□ -0.25
EPHB4-205ENST00000478459 FAM122CQ6P4D5 195 aa13.46□□□□□ -0.25
EPHB4-205ENST00000478459 HECTD4Q9Y4D8 3996 aa13.46□□□□□ -0.25
EPHB4-205ENST00000478459 DNAH17Q9UFH2 4485 aa13.46□□□□□ -0.26
EPHB4-205ENST00000478459 NACAE9PAV3 2078 aa13.45□□□□□ -0.26
EPHB4-205ENST00000478459 IGKV2-40A0A087WW87 121 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-205ENST00000478459 IGKV2D-40P01614 121 aaPredicted RBP13.45□□□□□ -0.26
EPHB4-205ENST00000478459 ICAM4Q14773 271 aa13.45□□□□□ -0.26
EPHB4-205ENST00000478459 OXA1LQ15070 435 aa13.45□□□□□ -0.26
EPHB4-205ENST00000478459 TMEM256Q8N2U0 113 aa13.45□□□□□ -0.26
EPHB4-205ENST00000478459 WDR61Q9GZS3 305 aaKnown RBP13.45□□□□□ -0.26
EPHB4-205ENST00000478459 NPIPB6E9PJ23 425 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 MPDU1O75352 247 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 MPC2O95563 127 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 HIST1H1EP10412 219 aaKnown RBP13.44□□□□□ -0.26
EPHB4-205ENST00000478459 TSPOP30536 169 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 CYCSP99999 105 aaKnown RBP13.44□□□□□ -0.26
EPHB4-205ENST00000478459 CHAC2Q8WUX2 184 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 C16orf74Q96GX8 76 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 FAM167A-AS1Q96KT0 104 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 FAT2Q9NYQ8 4349 aa13.44□□□□□ -0.26
EPHB4-205ENST00000478459 H7BYZ3 331 aa13.43□□□□□ -0.26
EPHB4-205ENST00000478459 NUDT3O95989 172 aa13.43□□□□□ -0.26
EPHB4-205ENST00000478459 LEPP41159 167 aa13.43□□□□□ -0.26
EPHB4-205ENST00000478459 BTN1A1Q13410 526 aa13.43□□□□□ -0.26
EPHB4-205ENST00000478459 TMEM14CQ9P0S9 112 aa13.43□□□□□ -0.26
EPHB4-205ENST00000478459 MBD2Q9UBB5 411 aa13.43□□□□□ -0.26
EPHB4-205ENST00000478459 RNASE8Q8TDE3 154 aaKnown RBP13.42□□□□□ -0.26
EPHB4-205ENST00000478459 TMEM263Q8WUH6 116 aaKnown RBP13.42□□□□□ -0.26
EPHB4-205ENST00000478459 ATP5SQ99766 215 aa13.42□□□□□ -0.26
EPHB4-205ENST00000478459 AGPAT4-IT1Q9H0P7 198 aa13.42□□□□□ -0.26
EPHB4-205ENST00000478459 HSPB11Q9Y547 144 aa13.42□□□□□ -0.26
EPHB4-205ENST00000478459 TIMM8BQ9Y5J9 83 aaPredicted RBP13.42□□□□□ -0.26
EPHB4-205ENST00000478459 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 GAGE7O76087 117 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 RPL12P30050 165 aaKnown RBP13.41□□□□□ -0.26
EPHB4-205ENST00000478459 RNASE4P34096 147 aaKnown RBP13.41□□□□□ -0.26
EPHB4-205ENST00000478459 CD300CQ08708 224 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 FFAR4Q5NUL3 377 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 Q6ZQT7 251 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 CCDC28AQ8IWP9 274 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 PHYHIPLQ96FC7 376 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 FAM210BQ96KR6 192 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 VGLL1Q99990 258 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 PAXXQ9BUH6 204 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 OR51M1Q9H341 326 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 ALG5Q9Y673 324 aa13.41□□□□□ -0.26
EPHB4-205ENST00000478459 OR7C2O60412 319 aa13.4□□□□□ -0.26
EPHB4-205ENST00000478459 ZNF253O75346 499 aa13.4□□□□□ -0.26
EPHB4-205ENST00000478459 ATP5G1P05496 136 aa13.4□□□□□ -0.26
EPHB4-205ENST00000478459 NBEAP1P0C6P0 100 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms