RNA–Protein interactions for RNA: ENST00000477893.1

ERCC8-205, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 752 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-205ENST00000477893 RPUSD4Q96CM3 377 aaKnown RBP5.94□□□□□ -1.46
ERCC8-205ENST00000477893 PARD6GQ9BYG4 376 aaPredicted RBP5.94□□□□□ -1.46
ERCC8-205ENST00000477893 WDR83OSQ9Y284 106 aa5.94□□□□□ -1.46
ERCC8-205ENST00000477893 YTHDF2Q9Y5A9 579 aaKnown RBP5.94□□□□□ -1.46
ERCC8-205ENST00000477893 PXMP4Q9Y6I8 212 aa5.94□□□□□ -1.46
ERCC8-205ENST00000477893 KMT2AQ03164 3969 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 PRAC2D3DTV9 90 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 H3BQ15 152 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 PRAF2O60831 178 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 RLN2P04090 185 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 SPART-AS1P0CW21 52 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 S100A11P31949 105 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 DEFA1P59665 94 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 DEFA3P59666 94 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 NHLH2Q02577 135 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 IL15RAQ13261 267 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 RRN3P1Q2M238 152 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 LCN15Q6UWW0 184 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 OR5C1Q8NGR4 320 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 OR1L4Q8NGR5 311 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 IGF2BP2-AS1Q96M15 143 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 DNAJC4Q9NNZ3 241 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 SLC39A9Q9NUM3 307 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 APLNQ9ULZ1 77 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 VPS13DQ5THJ4 4388 aa5.93□□□□□ -1.46
ERCC8-205ENST00000477893 DNAH10Q8IVF4 4471 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 TMEM189A5PLL7 270 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 E5RGE8 158 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 H0YIZ8 118 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 CRXO43186 299 aaPredicted RBP5.92□□□□□ -1.46
ERCC8-205ENST00000477893 PYYP10082 97 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 H2BFSP57053 126 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 VWC2Q2TAL6 325 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 LGALS9CQ6DKI2 356 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 BLNKQ8WV28 456 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 CLUHP3Q96NS8 147 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 LINC01587Q99440 93 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 PFDN5Q99471 154 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 NEU1Q99519 415 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 NPCDR1Q9BY65 106 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 SMIM3Q9BZL3 60 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 NMES1Q9C002 83 aa5.92□□□□□ -1.46
ERCC8-205ENST00000477893 ZNF331Q9NQX6 463 aaPredicted RBP5.92□□□□□ -1.46
ERCC8-205ENST00000477893 SMIM9A6NGZ8 99 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 A8MTW9 85 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 NPIPB6E9PJ23 425 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 AMBPP02760 352 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 IGLC2P0DOY2 106 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 DEFB130BP0DP73 79 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 DEFB130AP0DP74 79 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 CXCL2P19875 107 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 RPL29P47914 159 aaKnown RBP5.91□□□□□ -1.46
ERCC8-205ENST00000477893 DAD1P61803 113 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 KIR3DS1Q14943 382 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 ATP6V1FQ16864 119 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 OR10J6PQ8NGY7 276 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 PPP1R1CQ8WVI7 109 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 SLC50A1Q9BRV3 221 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 NIPSNAP3BQ9BS92 247 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 SLC25A31Q9H0C2 315 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 ZNF586Q9NXT0 402 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 DKK2Q9UBU2 259 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 RNF24Q9Y225 148 aa5.91□□□□□ -1.46
ERCC8-205ENST00000477893 M0R3E3 92 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 EIF3GO75821 320 aaKnown RBP eCLIP5.9□□□□□ -1.46
ERCC8-205ENST00000477893 AZU1P20160 251 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 HOXA5P20719 270 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 FCN2Q15485 313 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 MIR17HGQ75NE6 70 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 MARVELD1Q9BSK0 173 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 NDUFAF3Q9BU61 184 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 RNF126Q9BV68 326 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 SLC25A2Q9BXI2 301 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 BATF3Q9NR55 127 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 MBD2Q9UBB5 411 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 TIMM9Q9Y5J7 89 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 ALG5Q9Y673 324 aa5.9□□□□□ -1.46
ERCC8-205ENST00000477893 FRAS1Q86XX4 4008 aa5.9□□□□□ -1.47
ERCC8-205ENST00000477893 TEX48A0A1B0GUV7 120 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 MPDU1O75352 247 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 OR10J4P0C629 311 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 CDKN1BP46527 198 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 TCTAP57738 103 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 CYCSP99999 105 aaKnown RBP5.89□□□□□ -1.47
ERCC8-205ENST00000477893 ERCC8Q13216 396 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 GFI1BQ5VTD9 330 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 FAM122CQ6P4D5 195 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 UBE2DNLQ8IWF7 75 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 EXOC3-AS1Q8N2X6 119 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 SAT2Q96F10 170 aaPredicted RBP5.89□□□□□ -1.47
ERCC8-205ENST00000477893 ATP5SQ99766 215 aa5.89□□□□□ -1.47
ERCC8-205ENST00000477893 WDR61Q9GZS3 305 aaKnown RBP5.89□□□□□ -1.47
ERCC8-205ENST00000477893 TRBV19A0A075B6N1 114 aa5.88□□□□□ -1.47
ERCC8-205ENST00000477893 IGKV2-40A0A087WW87 121 aaPredicted RBP5.88□□□□□ -1.47
ERCC8-205ENST00000477893 TRAV12-3A0A0B4J271 114 aa5.88□□□□□ -1.47
ERCC8-205ENST00000477893 C17orf112F2Z3M2 114 aa5.88□□□□□ -1.47
ERCC8-205ENST00000477893 M0R2N4 97 aa5.88□□□□□ -1.47
ERCC8-205ENST00000477893 OR7C2O60412 319 aa5.88□□□□□ -1.47
ERCC8-205ENST00000477893 MPC2O95563 127 aa5.88□□□□□ -1.47
ERCC8-205ENST00000477893 IGKV2D-40P01614 121 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms