RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 PRSS48Q7RTY5 328 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 IQCF2Q8IXL9 164 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 THAP8Q8NA92 274 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 ZNF680Q8NEM1 530 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TMEM37Q8WXS4 190 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 LINC01600Q96MT4 127 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TXNL4BQ9NX01 149 aaKnown RBP4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TPRKBQ9Y3C4 175 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 TMEM56-RWDD3S4R434 201 aa4.74□□□□□ -1.65
SPTLC1-205ENST00000477888 A0A087X0K7 114 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 RNF222A6NCQ9 220 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 USP17L23D6RBM5 183 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 GABARAPH6UMI1 98 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 GABARAPO95166 117 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 CDS2O95674 445 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 PGAM2P15259 253 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 ORM2P19652 201 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 TCL1AP56279 114 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 LAGE3Q14657 143 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 ANXA2RQ3ZCQ2 193 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 GGNBP1Q5YKI7 109 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 STEAP1BQ6NZ63 245 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 C9orf47Q6ZRZ4 202 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 CCDC190Q86UF4 302 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 BAALCQ8WXS3 180 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 ZNF486Q96H40 463 aaPredicted RBP4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
SPTLC1-205ENST00000477888 LINC00854A0A1B0GVQ3 168 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 PRAC2D3DTV9 90 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 IGHV3-30P01768 117 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 IGHV3-33P01772 117 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 ORM1P02763 201 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 CT45A10P0DMU9 189 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 IGHV3-30-3P0DP02 117 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 IGHV3-30-5P0DP03 117 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 RPL7P18124 248 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 SDC2P34741 201 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 RCVRNP35243 200 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 ATP5IP56385 69 aaPredicted RBP4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 KRTAP10-8P60410 259 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 MEF2DQ14814 521 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 LGI3Q8N145 548 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 Q8N976 141 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 RNASE11Q8TAA1 199 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 LHFPL5Q8TAF8 219 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 PCNPQ8WW12 178 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 SLC35E1Q96K37 410 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 TXNDC17Q9BRA2 123 aa4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 MRPL16Q9NX20 251 aaKnown RBP4.72□□□□□ -1.65
SPTLC1-205ENST00000477888 FSIP2Q5CZC0 6907 aa4.71□□□□□ -1.65
SPTLC1-205ENST00000477888 TRGV4A0A0C4DH28 118 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 H3BRN7 92 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 S100A7P31151 101 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 PRSS3P35030 304 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 ZNF846Q147U1 533 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 IBA57Q5T440 356 aaKnown RBP4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 GPR107Q5VW38 600 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 LHFPL1Q86WI0 220 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 GPX8Q8TED1 209 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 GLYATL2Q8WU03 294 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 S100A16Q96FQ6 103 aaKnown RBP4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 ZNF479Q96JC4 524 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 ODF3Q96PU9 254 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 TMEM147Q9BVK8 224 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 SLC25A31Q9H0C2 315 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 TMEM222Q9H0R3 208 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 CACFD1Q9UGQ2 172 aa4.71□□□□□ -1.66
SPTLC1-205ENST00000477888 TRAV8-3A0A0A6YYJ7 113 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 TRAV8-6A0A0B4J262 113 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 A0A0U1RQV1 116 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 MRPS12O15235 138 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 SFTA3P0C7M3 94 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 LEPP41159 167 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 MXD1Q05195 221 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 SH2D6Q7Z4S9 175 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 SELENOHQ8IZQ5 122 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 EIF4E3Q8N5X7 224 aaKnown RBP4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 BPIFCQ8NFQ6 507 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 LRRC20Q8TCA0 184 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 DTD1Q8TEA8 209 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 TP53TG3Q9ULZ0 132 aa4.7□□□□□ -1.66
SPTLC1-205ENST00000477888 A0A0J9YXV3 536 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 LOC100131303A0A0U1RQF7 123 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 C7orf71A4D174 169 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 PMS2P5A8MQ11 134 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 C9JCJ5 164 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 SLC25A5P05141 298 aaKnown RBP4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 PPT1P50897 306 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 CD300CQ08708 224 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 OR10J3Q5JRS4 329 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 Q8N3U1 123 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 HSD17B11Q8NBQ5 300 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 OR10G4Q8NGN3 311 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 OR1S1Q8NH92 325 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 RBKSQ9H477 322 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 DPH3P1Q9H4G8 78 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 COPZ2Q9P299 210 aa4.69□□□□□ -1.66
SPTLC1-205ENST00000477888 COX11Q9Y6N1 276 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms