RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 NMSQ5H8A3 153 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 SPANXN2Q5MJ10 180 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 LPCAT3Q6P1A2 487 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 SSX7Q7RTT5 188 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 SNX29P2Q8IUI4 249 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 FAM219AQ8IW50 185 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 BAP18Q8IXM2 172 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 SELENOHQ8IZQ5 122 aaKnown RBP3.13□□□□□ -1.91
CKS1B-207ENST00000477676 LYPD1Q8N2G4 141 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 OR11H7Q8NGC8 314 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 OR13C8Q8NGS7 320 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 OR52E5Q8NH55 327 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 OR52I2Q8NH67 350 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 RNASEH2CQ8TDP1 164 aaKnown RBP3.13□□□□□ -1.91
CKS1B-207ENST00000477676 FCGR1BQ92637 280 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 NARS2Q96I59 477 aaKnown RBP3.13□□□□□ -1.91
CKS1B-207ENST00000477676 IGF2BP2-AS1Q96M15 143 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 ATG101Q9BSB4 218 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 RTBDNQ9BSG5 229 aaPredicted RBP3.13□□□□□ -1.91
CKS1B-207ENST00000477676 Q9H3A6 140 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 Q9H8V8 135 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 GPN1Q9HCN4 374 aaPredicted RBP3.13□□□□□ -1.91
CKS1B-207ENST00000477676 GSN-AS1Q9NRJ2 163 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 CACNG5Q9UF02 275 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 RAB26Q9ULW5 256 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 GOLT1BQ9Y3E0 138 aa3.13□□□□□ -1.91
CKS1B-207ENST00000477676 TRAV12-2A0A075B6T6 113 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 LYRM9A8MSI8 78 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 PRAC2D3DTV9 90 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 F5H768 121 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 ISLRO14498 428 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 HPGDSO60760 199 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 ATP6V1G1O75348 118 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 OR5AC1P0C628 307 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 SLC25A4P12235 298 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 PGAM2P15259 253 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 RCVRNP35243 200 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 TAGLN2P37802 199 aaKnown RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 ALDH3B2P48448 385 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 EIF2B2P49770 351 aaKnown RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 CNN1P51911 297 aaKnown RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 POLR2GP62487 172 aaKnown RBP eCLIP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 SUPT4H1P63272 117 aaKnown RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 HAMPP81172 84 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 ARL16Q0P5N6 197 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 OR2F1Q13607 317 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 SPINK13Q1W4C9 94 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 Q5VSD8 79 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 FAAP20Q6NZ36 180 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 Q75L30 129 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 RNF182Q8N6D2 247 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 BPIFCQ8NFQ6 507 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 MARCH1Q8TCQ1 289 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 YIPF6Q96EC8 236 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 ZNF486Q96H40 463 aaPredicted RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 C7orf50Q9BRJ6 194 aaKnown RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 PBDC1Q9BVG4 233 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 SLC25A39Q9BZJ4 359 aaPredicted RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 TMEM222Q9H0R3 208 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 MAGT1Q9H0U3 335 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.12□□□□□ -1.91
CKS1B-207ENST00000477676 ZNF586Q9NXT0 402 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 DOK5Q9P104 306 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 COMMD3Q9UBI1 195 aa3.12□□□□□ -1.91
CKS1B-207ENST00000477676 TRAV26-1A0A087WT03 109 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 TEX13DA0A0J9YY54 714 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-207ENST00000477676 CEBPZOSA8MTT3 80 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 ZNF701M0R085 212 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-207ENST00000477676 CTDSPLO15194 276 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 GSTZ1O43708 216 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-207ENST00000477676 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-207ENST00000477676 ATP5G1P05496 136 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
CKS1B-207ENST00000477676 S100GP29377 79 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 TSPOP30536 169 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 ID1P41134 155 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 ATP5G3P48201 142 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 CEBPGP53567 150 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 CCL18P55774 89 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 LINC00315P59091 139 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 LYZP61626 148 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 NCS1P62166 190 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 TRIM16LQ309B1 348 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 C1orf194Q5T5A4 169 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 SPATA31B1PQ5VZV4 182 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 OR8G2PQ6IF36 304 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 LINC00612Q8N6U2 182 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 TERB2Q8NHR7 220 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 COQ8AQ8NI60 647 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 IL22RA2Q969J5 263 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 SGK494Q96LW2 274 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 UPK3BQ9BT76 320 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 RSG1Q9BU20 258 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 PDCD10Q9BUL8 212 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 RBKSQ9H477 322 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 ENY2Q9NPA8 101 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 COPZ2Q9P299 210 aa3.11□□□□□ -1.91
CKS1B-207ENST00000477676 MTFP1Q9UDX5 166 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms