RNA–Protein interactions for RNA: ENST00000476658.5

DFFA-203, Transcript of DNA fragmentation factor subunit alpha, humanhuman

TSL 3

Gene DFFA, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFA-203ENST00000476658 A0A1W2PPV4 95 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 EIF3GO75821 320 aaKnown RBP eCLIP10.88□□□□□ -0.67
DFFA-203ENST00000476658 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
DFFA-203ENST00000476658 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 ATP6V0CP27449 155 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 UBE2L3P68036 154 aaKnown RBP10.88□□□□□ -0.67
DFFA-203ENST00000476658 RBMY1FQ15415 496 aaKnown RBP10.88□□□□□ -0.67
DFFA-203ENST00000476658 KHDC3LQ587J8 217 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 FAM122CQ6P4D5 195 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 ZNF705AQ6ZN79 300 aaPredicted RBP10.88□□□□□ -0.67
DFFA-203ENST00000476658 EXOC3-AS1Q8N2X6 119 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 FXYD5Q96DB9 178 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 IGF2BP2-AS1Q96M15 143 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 TMEM208Q9BTX3 173 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 TENM2Q9NT68 2774 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 PRELID1Q9Y255 219 aa10.88□□□□□ -0.67
DFFA-203ENST00000476658 M0R3E3 92 aa10.87□□□□□ -0.67
DFFA-203ENST00000476658 INSP01308 110 aa10.87□□□□□ -0.67
DFFA-203ENST00000476658 RPL7L1Q6DKI1 246 aaKnown RBP10.87□□□□□ -0.67
DFFA-203ENST00000476658 OR10G4Q8NGN3 311 aa10.87□□□□□ -0.67
DFFA-203ENST00000476658 OR10G9Q8NGN4 311 aa10.87□□□□□ -0.67
DFFA-203ENST00000476658 OR10G7Q8NGN6 311 aa10.87□□□□□ -0.67
DFFA-203ENST00000476658 OR2G3Q8NGZ4 309 aa10.87□□□□□ -0.67
DFFA-203ENST00000476658 MRPL53Q96EL3 112 aaKnown RBP10.87□□□□□ -0.67
DFFA-203ENST00000476658 PSMG3Q9BT73 122 aaPredicted RBP10.87□□□□□ -0.67
DFFA-203ENST00000476658 TRAV12-2A0A075B6T6 113 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 NANOS2P60321 138 aaKnown RBP10.86□□□□□ -0.67
DFFA-203ENST00000476658 ICAM4Q14773 271 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 C1orf158Q8N1D5 194 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 ZNF503Q96F45 646 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 PHYHIPLQ96FC7 376 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 NEU1Q99519 415 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 SH3BGRL3Q9H299 93 aa10.86□□□□□ -0.67
DFFA-203ENST00000476658 SMIM9A6NGZ8 99 aa10.85□□□□□ -0.67
DFFA-203ENST00000476658 HMGB3O15347 200 aaKnown RBP10.85□□□□□ -0.67
DFFA-203ENST00000476658 CRXO43186 299 aaPredicted RBP10.85□□□□□ -0.67
DFFA-203ENST00000476658 HBE1P02100 147 aa10.85□□□□□ -0.67
DFFA-203ENST00000476658 CDC34P49427 236 aaPredicted RBP10.85□□□□□ -0.67
DFFA-203ENST00000476658 SERF2P84101 59 aa10.85□□□□□ -0.67
DFFA-203ENST00000476658 GNPNAT1Q96EK6 184 aaPredicted RBP10.85□□□□□ -0.67
DFFA-203ENST00000476658 DYNC2H1Q8NCM8 4307 aaKnown RBP10.85□□□□□ -0.67
DFFA-203ENST00000476658 NUPR2A6NF83 97 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 NPIPB6E9PJ23 425 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 TAAR5O14804 337 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 MBP02144 154 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 TSPOP30536 169 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 CDKN1BP46527 198 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 EMP1P54849 157 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 RANP62826 216 aaKnown RBP10.84□□□□□ -0.67
DFFA-203ENST00000476658 PQLC2Q6ZP29 291 aa10.84□□□□□ -0.67
DFFA-203ENST00000476658 RPP25LQ8N5L8 163 aaKnown RBP10.84□□□□□ -0.67
DFFA-203ENST00000476658 KMT2CQ8NEZ4 4911 aaKnown RBP10.84□□□□□ -0.67
DFFA-203ENST00000476658 JTBO76095 146 aa10.83□□□□□ -0.68
DFFA-203ENST00000476658 RRN3P1Q2M238 152 aa10.83□□□□□ -0.68
DFFA-203ENST00000476658 PHLDA1Q8WV24 401 aaPredicted RBP10.83□□□□□ -0.68
DFFA-203ENST00000476658 Q9H3A6 140 aa10.83□□□□□ -0.68
DFFA-203ENST00000476658 IGKV2-40A0A087WW87 121 aaPredicted RBP10.82□□□□□ -0.68
DFFA-203ENST00000476658 LOC102723971A0A1B0GUV8 181 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 TMEM189A5PLL7 270 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 J3KRW8 73 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 IGKV2D-40P01614 121 aaPredicted RBP10.82□□□□□ -0.68
DFFA-203ENST00000476658 CT45A10P0DMU9 189 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 CSN1S1P47710 185 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 ERCC8Q13216 396 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 CEMP1Q6PRD7 247 aaPredicted RBP10.82□□□□□ -0.68
DFFA-203ENST00000476658 LYPD1Q8N2G4 141 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 OR11H4Q8NGC9 324 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 RAB24Q969Q5 203 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 LINC01587Q99440 93 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 ACTR3CQ9C0K3 210 aaPredicted RBP10.82□□□□□ -0.68
DFFA-203ENST00000476658 CELA1Q9UNI1 258 aa10.82□□□□□ -0.68
DFFA-203ENST00000476658 HMSDA8MTL9 139 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 ZNF705GA8MUZ8 300 aaPredicted RBP10.81□□□□□ -0.68
DFFA-203ENST00000476658 ARL14EPLP0DKL9 152 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 LEPP41159 167 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 ZNF345Q14585 488 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 KIR3DS1Q14943 382 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 Q6ZNX1 250 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 TMEM256Q8N2U0 113 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 KCNRGQ8N5I3 272 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 ODF3Q96PU9 254 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 ARPC5LQ9BPX5 153 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 CYTL1Q9NRR1 136 aa10.81□□□□□ -0.68
DFFA-203ENST00000476658 PRM2P04554 102 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 HTN1P15515 57 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 TMEM78Q5T7P6 136 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 GFI1BQ5VTD9 330 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 ZNF767PQ75MW2 155 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 HYLS1Q96M11 299 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 LINC00477Q96M19 166 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 AGPAT4-IT1Q9H0P7 198 aa10.8□□□□□ -0.68
DFFA-203ENST00000476658 KLK5Q9Y337 293 aaPredicted RBP10.8□□□□□ -0.68
DFFA-203ENST00000476658 A0A0D9SG52 128 aa10.79□□□□□ -0.68
DFFA-203ENST00000476658 SPART-AS1P0CW21 52 aa10.79□□□□□ -0.68
DFFA-203ENST00000476658 FAM74A1Q5RGS3 127 aa10.79□□□□□ -0.68
DFFA-203ENST00000476658 AKR1C8PQ5T2L2 129 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms