RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 IGHV4-4A0A075B6R2 117 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 ZNF705GA8MUZ8 300 aaPredicted RBP8.29□□□□□ -1.08
CPNE1-222ENST00000473373 SLC17A3O00476 420 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 RPL12P30050 165 aaKnown RBP8.29□□□□□ -1.08
CPNE1-222ENST00000473373 CDKN1BP46527 198 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 FAM222AQ5U5X8 452 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 C1orf158Q8N1D5 194 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 ATP5SQ99766 215 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 MED28Q9H204 178 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 MBD2Q9UBB5 411 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 HSPB11Q9Y547 144 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 YTHDF2Q9Y5A9 579 aaKnown RBP8.29□□□□□ -1.08
CPNE1-222ENST00000473373 ALG5Q9Y673 324 aa8.29□□□□□ -1.08
CPNE1-222ENST00000473373 HERC2O95714 4834 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 H3BQ15 152 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 MRPS12O15235 138 aaKnown RBP8.28□□□□□ -1.08
CPNE1-222ENST00000473373 OR7C2O60412 319 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 PTTG1O95997 202 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 IGLC2P0DOY2 106 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 PYYP10082 97 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 C12orf74Q32Q52 190 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 FFAR4Q5NUL3 377 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 LGALS9CQ6DKI2 356 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 AMTNQ6UX39 209 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 TMEM256Q8N2U0 113 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 RPP25LQ8N5L8 163 aaKnown RBP8.28□□□□□ -1.08
CPNE1-222ENST00000473373 NDUFAF3Q9BU61 184 aa8.28□□□□□ -1.08
CPNE1-222ENST00000473373 WDR61Q9GZS3 305 aaKnown RBP8.28□□□□□ -1.08
CPNE1-222ENST00000473373 H0YIZ8 118 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 HIST1H1EP10412 219 aaKnown RBP8.27□□□□□ -1.09
CPNE1-222ENST00000473373 LEPP41159 167 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 GCSAMLQ5JQS6 135 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 UBE2DNLQ8IWF7 75 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 CCDC28AQ8IWP9 274 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 RNF126Q9BV68 326 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 MRPL32Q9BYC8 188 aaKnown RBP8.27□□□□□ -1.09
CPNE1-222ENST00000473373 OR51M1Q9H341 326 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 ZNF586Q9NXT0 402 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 DKK2Q9UBU2 259 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 ALMS1Q8TCU4 4167 aa8.27□□□□□ -1.09
CPNE1-222ENST00000473373 A8MTW9 85 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 OR10J4P0C629 311 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 DEFB130BP0DP73 79 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 DEFB130AP0DP74 79 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 TAS2R45P59539 299 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 MIR17HGQ75NE6 70 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 CHAC2Q8WUX2 184 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 PAXXQ9BUH6 204 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 PARD6GQ9BYG4 376 aaPredicted RBP8.26□□□□□ -1.09
CPNE1-222ENST00000473373 TMEM14CQ9P0S9 112 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 PRELID1Q9Y255 219 aa8.26□□□□□ -1.09
CPNE1-222ENST00000473373 TRBV19A0A075B6N1 114 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 A0A1W2PPV4 95 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 CRXO43186 299 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-222ENST00000473373 ZNF253O75346 499 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 CSN1S1P47710 185 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 TAS2R60P59551 318 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 UBE2L3P68036 154 aaKnown RBP8.25□□□□□ -1.09
CPNE1-222ENST00000473373 PDE6HQ13956 83 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 ICAM4Q14773 271 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 KHDC3LQ587J8 217 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 FAM122CQ6P4D5 195 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 EXOC3-AS1Q8N2X6 119 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 SAT2Q96F10 170 aaPredicted RBP8.25□□□□□ -1.09
CPNE1-222ENST00000473373 C16orf74Q96GX8 76 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 SLC25A2Q9BXI2 301 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 APLNQ9ULZ1 77 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 FUT9Q9Y231 359 aa8.25□□□□□ -1.09
CPNE1-222ENST00000473373 TRAV12-3A0A0B4J271 114 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 LYRM9A8MSI8 78 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 SNURFLB1AK76 121 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 PRAC2D3DTV9 90 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 H7BYZ3 331 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 M0R3E3 92 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 PRM2P04554 102 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 NBEAP1P0C6P0 100 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 ACOT6Q3I5F7 207 aaPredicted RBP8.24□□□□□ -1.09
CPNE1-222ENST00000473373 TMEM78Q5T7P6 136 aa8.24□□□□□ -1.09
CPNE1-222ENST00000473373 MRPL53Q96EL3 112 aaKnown RBP8.24□□□□□ -1.09
CPNE1-222ENST00000473373 P0DMU3 169 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 FAM231AP0DMU4 169 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 FAM231CP0DMU5 169 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 ERCC8Q13216 396 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 ZNF266Q14584 549 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 FCN2Q15485 313 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 INO80EQ8NBZ0 244 aaPredicted RBP8.23□□□□□ -1.09
CPNE1-222ENST00000473373 RNF141Q8WVD5 230 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 C20orf144Q9BQM9 153 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 RPH3ALQ9UNE2 315 aa8.23□□□□□ -1.09
CPNE1-222ENST00000473373 TIMM8BQ9Y5J9 83 aaPredicted RBP8.23□□□□□ -1.09
CPNE1-222ENST00000473373 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 F5H768 121 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 GPX1P07203 203 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 AZU1P20160 251 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 RANP62826 216 aaKnown RBP8.22□□□□□ -1.09
CPNE1-222ENST00000473373 OXA1LQ15070 435 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 RGS21Q2M5E4 152 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 FAM74A1Q5RGS3 127 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 GFI1BQ5VTD9 330 aa8.22□□□□□ -1.09
CPNE1-222ENST00000473373 CMTM2Q8TAZ6 248 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms