RNA–Protein interactions for RNA: ENST00000472119.1

SCN9A-206, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 2

Gene SCN9A, Length 905 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-206ENST00000472119 SRD5A3Q9H8P0 318 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 MAP6D1Q9H9H5 199 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 NRN1Q9NPD7 142 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 MSRB1Q9NZV6 116 aa4.95□□□□□ -1.62
SCN9A-206ENST00000472119 TRAV2A0A0B4J234 112 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 HMSDA8MTL9 139 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 A8MZ25 164 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 H3BTX0 84 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 EIF3GO75821 320 aaKnown RBP eCLIP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 PRB4P10163 310 aaPredicted RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 RPL35AP18077 110 aaKnown RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 RPL7P18124 248 aaKnown RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 CXCL2P19875 107 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 ATP6V0CP27449 155 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 CMC4P56277 68 aaPredicted RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 CD300CQ08708 224 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF266Q14584 549 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 PSMG4Q5JS54 123 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 FAM78BQ5VT40 261 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 SPATA31B1PQ5VZV4 182 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 RPL7L1Q6DKI1 246 aaKnown RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 MIR17HGQ75NE6 70 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 S100A7AQ86SG5 101 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 SBSPONQ8IVN8 264 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 GATAD1Q8WUU5 269 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 LINC00052Q96N35 136 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 GPR82Q96P67 336 aa4.94□□□□□ -1.62
SCN9A-206ENST00000472119 PARD6GQ9BYG4 376 aaPredicted RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 SEPSECSQ9HD40 501 aaKnown RBP4.94□□□□□ -1.62
SCN9A-206ENST00000472119 BORCS7-ASMTA0A0B4J1R7 106 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 KNCNA6PVL3 124 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 H3BQ15 152 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 SOCS3O14543 225 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 MRPS12O15235 138 aaKnown RBP4.93□□□□□ -1.62
SCN9A-206ENST00000472119 ID1P41134 155 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 DEFB1P60022 68 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 SNRPD3P62318 126 aaKnown RBP4.93□□□□□ -1.62
SCN9A-206ENST00000472119 HAGHQ16775 308 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 LINC00322Q6ZN03 302 aaPredicted RBP4.93□□□□□ -1.62
SCN9A-206ENST00000472119 AKAP14Q86UN6 197 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 BPIFA4PQ86YQ2 179 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 TCTE3Q8IZS6 198 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 KCNRGQ8N5I3 272 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 B9D2Q9BPU9 175 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 ARPC5LQ9BPX5 153 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 FAM110AQ9BQ89 295 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 SH3BGRL3Q9H299 93 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 CYTL1Q9NRR1 136 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 KCNIP2Q9NS61 270 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 TIMM9Q9Y5J7 89 aa4.93□□□□□ -1.62
SCN9A-206ENST00000472119 LOC102724200A0A096LPH7 203 aaPredicted RBP4.92□□□□□ -1.62
SCN9A-206ENST00000472119 TRAV8-2A0A0B4J237 113 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 A0A0D9SG52 128 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 ISLRO14498 428 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 TAAR5O14804 337 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 C1QBP02746 253 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 IGLC2P0DOY2 106 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 PYYP10082 97 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 HLA-DMBP28068 263 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 PSMB3P49720 205 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 MEOX2P50222 304 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 RAB2AP61019 212 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 RHOBP62745 196 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF345Q14585 488 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 ACOT6Q3I5F7 207 aaPredicted RBP4.92□□□□□ -1.62
SCN9A-206ENST00000472119 LGALSLQ3ZCW2 172 aaPredicted RBP4.92□□□□□ -1.62
SCN9A-206ENST00000472119 ACTL10Q5JWF8 245 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 FAM122CQ6P4D5 195 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 TMUB2Q71RG4 321 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 RNF182Q8N6D2 247 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 OR10G4Q8NGN3 311 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 OR10G9Q8NGN4 311 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 OR10G7Q8NGN6 311 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 OR2G3Q8NGZ4 309 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 LRRC20Q8TCA0 184 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 BLNKQ8WV28 456 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 FAM167A-AS1Q96KT0 104 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 PSMG3Q9BT73 122 aaPredicted RBP4.92□□□□□ -1.62
SCN9A-206ENST00000472119 SLC25A2Q9BXI2 301 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 MRPL32Q9BYC8 188 aaKnown RBP4.92□□□□□ -1.62
SCN9A-206ENST00000472119 ZNF586Q9NXT0 402 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 RNF24Q9Y225 148 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 FUT9Q9Y231 359 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 TGP01266 2768 aa4.92□□□□□ -1.62
SCN9A-206ENST00000472119 DNAH9Q9NYC9 4486 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 A0A087X0K7 114 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 A0A1W2PPV4 95 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 KANTRA0A1W2PQU2 76 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 F6UB75 175 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 SLC17A3O00476 420 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 HMGB3O15347 200 aaKnown RBP4.91□□□□□ -1.62
SCN9A-206ENST00000472119 BCL2L11O43521 198 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 PFDN1O60925 122 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 OR10J4P0C629 311 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 M6PRP20645 277 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 GDF5OSQ5U4N7 250 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 STHQ8IWL8 128 aa4.91□□□□□ -1.62
SCN9A-206ENST00000472119 RPP25LQ8N5L8 163 aaKnown RBP4.91□□□□□ -1.62
SCN9A-206ENST00000472119 GNPNAT1Q96EK6 184 aaPredicted RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms