RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ZNF680Q8NEM1 530 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 OR52I2Q8NH67 350 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 PYGO2Q9BRQ0 406 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 SHANK2-AS3Q9BTD1 123 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 ARL6Q9H0F7 186 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 HSPB7Q9UBY9 170 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 CACFD1Q9UGQ2 172 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 KCNIP3Q9Y2W7 256 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 LRP1Q07954 4544 aaKnown RBP4.6□□□□□ -1.67
HDAC1-204ENST00000471488 A0A1B0GVG6 124 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 RBFOX3A6NFN3 312 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 DISC1C4P0D8 188 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 K7EQD1 137 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 RGS13O14921 159 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 CT45A10P0DMU9 189 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 TAS2R19P59542 299 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 RPP30P78346 268 aaKnown RBP4.59□□□□□ -1.67
HDAC1-204ENST00000471488 SLAQ13239 276 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 BTN1A1Q13410 526 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 OR10J3Q5JRS4 329 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 CYP2G1PQ6ZSU1 146 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 ST6GAL2Q96JF0 529 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 RTBDNQ9BSG5 229 aaPredicted RBP4.59□□□□□ -1.67
HDAC1-204ENST00000471488 SLC45A2Q9UMX9 530 aa4.59□□□□□ -1.67
HDAC1-204ENST00000471488 IGHV3-38A0A0C4DH36 116 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 C7orf71A4D174 169 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 TMEM127O75204 238 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 IGLV2-11P01706 119 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 APOA1P02647 267 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 TNFSF8P32971 234 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 ATP5IP56385 69 aaPredicted RBP4.58□□□□□ -1.68
HDAC1-204ENST00000471488 RPL37AP61513 92 aaKnown RBP4.58□□□□□ -1.68
HDAC1-204ENST00000471488 RRAS2P62070 204 aaPredicted RBP4.58□□□□□ -1.68
HDAC1-204ENST00000471488 ERCC8Q13216 396 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 LCN15Q6UWW0 184 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 S100A7AQ86SG5 101 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 EIF4E3Q8N5X7 224 aaKnown RBP4.58□□□□□ -1.68
HDAC1-204ENST00000471488 LRTM2Q8N967 370 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 ZNF431Q8TF32 576 aaPredicted RBP4.58□□□□□ -1.68
HDAC1-204ENST00000471488 TXNDC17Q9BRA2 123 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 SLC50A1Q9BRV3 221 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 SLC25A31Q9H0C2 315 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 TP53TG3Q9ULZ0 132 aa4.58□□□□□ -1.68
HDAC1-204ENST00000471488 hCG_2014768A0A024R1R8 64 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 A0A087X0K7 114 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 TRAV8-6A0A0B4J262 113 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 LOC100131303A0A0U1RQF7 123 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 K7EP13 123 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 SLC17A3O00476 420 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 SPINK4O60575 86 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 C1QBP02746 253 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 GPX1P07203 203 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 TBPP20226 339 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 CD300CQ08708 224 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 FHL2Q14192 279 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 WFDC2Q14508 124 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 TEPPQ6URK8 271 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 LINC00305Q7Z4B0 112 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 TMEM229BQ8NBD8 167 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 C11orf72Q8NBR9 251 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 BLNKQ8WV28 456 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 ZNF479Q96JC4 524 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 MRPL32Q9BYC8 188 aaKnown RBP4.57□□□□□ -1.68
HDAC1-204ENST00000471488 ARV1Q9H2C2 271 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 ZNF331Q9NQX6 463 aaPredicted RBP4.57□□□□□ -1.68
HDAC1-204ENST00000471488 MCUBQ9NWR8 336 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 EXTL2Q9UBQ6 330 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 MTFP1Q9UDX5 166 aa4.57□□□□□ -1.68
HDAC1-204ENST00000471488 A0A0B4J2A0 478 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 IGHV3-16A0A0C4DH30 117 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 LOC105371267A0A1B0GV96 52 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 C9JCJ5 164 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 GOSR2O14653 212 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 COX7A2P2O60397 106 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 MPDU1O75352 247 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 MED6O75586 246 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 ORM1P02763 201 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 SLC25A5P05141 298 aaKnown RBP4.56□□□□□ -1.68
HDAC1-204ENST00000471488 ANXA3P12429 323 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 TCL1AP56279 114 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 SLC38A11Q08AI6 406 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 MUC21Q5SSG8 566 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 MZT2AQ6P582 158 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 BPIFA4PQ86YQ2 179 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 CLVS1Q8IUQ0 354 aaPredicted RBP4.56□□□□□ -1.68
HDAC1-204ENST00000471488 BAALCQ8WXS3 180 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 VGLL1Q99990 258 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 CHAC1Q9BUX1 264 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 TM2D2Q9BX73 214 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 DPH3P1Q9H4G8 78 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 VCX3AQ9NNX9 186 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 NDUFA13Q9P0J0 144 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 SHPKQ9UHJ6 478 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 RAB26Q9ULW5 256 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 STRAPQ9Y3F4 350 aaKnown RBP4.56□□□□□ -1.68
HDAC1-204ENST00000471488 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
HDAC1-204ENST00000471488 IBA57-AS1B1ANH7 110 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 RGS5O15539 181 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 SYNGR2O43760 224 aa4.55□□□□□ -1.68
HDAC1-204ENST00000471488 S100A6P06703 90 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 107.6 ms