RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 MIAQ16674 131 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 TMEM244Q5VVB8 128 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 C2orf91Q6ZV80 131 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 LINC00305Q7Z4B0 112 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 ST20-AS1Q8NBB2 130 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 MUC7Q8TAX7 377 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 SMCR5Q8TEV8 140 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 SCGB3A1Q96QR1 104 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 HIST1H2BLQ99880 126 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 MIEN1Q9BRT3 115 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 ADAT1Q9BUB4 502 aaKnown RBP2.86□□□□□ -1.95
SCFD1-205ENST00000469043 LINC00470Q9BZP3 86 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 BAIAP2Q9UQB8 552 aa2.86□□□□□ -1.95
SCFD1-205ENST00000469043 COL11A1P12107 1806 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-205ENST00000469043 PTPRBP23467 1997 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 WDR90Q96KV7 1748 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 ARHGAP32A7KAX9 2087 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 IGHV1-58A0A0C4DH39 117 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 FAM92AA1XBS5 289 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 C19orf84I3L1E1 186 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 ZNF25P17030 456 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 RNASE4P34096 147 aaKnown RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 ARPP19P56211 112 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 RPS25P62851 125 aaKnown RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 LGALSLQ3ZCW2 172 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 FAM229BQ4G0N7 80 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 TMEM69Q5SWH9 247 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 MSRB3Q8IXL7 192 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 TEX29Q8N6K0 151 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 APCDD1LQ8NCL9 501 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 GINS4Q9BRT9 223 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 TCEAL7Q9BRU2 100 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 ZNF471Q9BX82 626 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 CBLN4Q9NTU7 201 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 ASF1BQ9NVP2 202 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 MRPL16Q9NX20 251 aaKnown RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 GNG8Q9UK08 70 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 ZNF443Q9Y2A4 671 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-205ENST00000469043 COL4A5P29400 1685 aa2.85□□□□□ -1.95
SCFD1-205ENST00000469043 PAPPA2Q9BXP8 1791 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 CACNA1DQ01668 2161 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 A0A0J9YW62 118 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 TRBV7-6A0A0J9YX20 115 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 C16orf90A8MZG2 172 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 LY6LH3BQJ8 138 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 XCL1P47992 114 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 EIF2B2P49770 351 aaKnown RBP2.84□□□□□ -1.95
SCFD1-205ENST00000469043 RAB5CP51148 216 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 HBBP68871 147 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 NOXRED1Q6NXP6 359 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 C22orf39Q6P5X5 142 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 TMEM14EPQ6UXP3 125 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 KRTAP11-1Q8IUC1 163 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 SIGLECL1Q8N7X8 197 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 KLF14Q8TD94 323 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-205ENST00000469043 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 TMEM106AQ96A25 262 aa2.84□□□□□ -1.95
SCFD1-205ENST00000469043 ATG2AQ2TAZ0 1938 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 COL4A4P53420 1690 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-205ENST00000469043 LOC285556D6RIA3 1793 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 TRGV10A0A0A0MS01 117 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 IGHV3-15A0A0B4J1V0 119 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 A0A1W2PQD3 144 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 C7orf66A4D0T2 115 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 C17orf98A8MV24 154 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 H3BT86 120 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 K7ERJ3 54 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 SLC22A1O15245 554 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 TSPAN19P0C672 248 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 RPL35P42766 123 aaKnown RBP2.83□□□□□ -1.96
SCFD1-205ENST00000469043 COPZ1P61923 177 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 ZNF117Q03924 483 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-205ENST00000469043 AMMECR1LQ6DCA0 310 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 OR10P1Q8NGE3 313 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 FGF13Q92913 245 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 IMMP2LQ96T52 175 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 NPCDR1Q9BY65 106 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 TNFSF18Q9UNG2 199 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 HS3ST2Q9Y278 367 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 PLXNA1Q9UIW2 1896 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 MCM3APO60318 1980 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 UTRNP46939 3433 aa2.83□□□□□ -1.96
SCFD1-205ENST00000469043 TRAV13-1A0A0B4J241 112 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 MEIS3P1A6NDR6 274 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 H3BMG7 143 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 C3orf84H3BNL1 204 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 NDUFB3O43676 98 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 CREBL2O60519 120 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-205ENST00000469043 HIST1H2BKO60814 126 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 HIST1H2BJP06899 126 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 MSMBP08118 114 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 IGLC6P0CF74 106 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 LINC00694P0DN24 101 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 MUC1P15941 1255 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-205ENST00000469043 RPL22P35268 128 aaKnown RBP2.82□□□□□ -1.96
SCFD1-205ENST00000469043 RPL28P46779 137 aaKnown RBP2.82□□□□□ -1.96
SCFD1-205ENST00000469043 LINC00483Q53H64 154 aa2.82□□□□□ -1.96
SCFD1-205ENST00000469043 HAGHLQ6PII5 290 aaPredicted RBP2.82□□□□□ -1.96
SCFD1-205ENST00000469043 PHF5AQ7RTV0 110 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms