RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 NPCDR1Q9BY65 106 aa12.2□□□□□ -0.46
SSBP1-207ENST00000468267 PPP1R14DQ9NXH3 145 aa12.2□□□□□ -0.46
SSBP1-207ENST00000468267 TRAV12-2A0A075B6T6 113 aa12.19□□□□□ -0.46
SSBP1-207ENST00000468267 SSNA1O43805 119 aa12.19□□□□□ -0.46
SSBP1-207ENST00000468267 PPP1R1CQ8WVI7 109 aa12.19□□□□□ -0.46
SSBP1-207ENST00000468267 YTHDF2Q9Y5A9 579 aaKnown RBP12.19□□□□□ -0.46
SSBP1-207ENST00000468267 ZNF705GA8MUZ8 300 aaPredicted RBP12.18□□□□□ -0.46
SSBP1-207ENST00000468267 PRAC2D3DTV9 90 aa12.18□□□□□ -0.46
SSBP1-207ENST00000468267 PRM2P04554 102 aa12.18□□□□□ -0.46
SSBP1-207ENST00000468267 OXA1LQ15070 435 aa12.18□□□□□ -0.46
SSBP1-207ENST00000468267 THAP6Q8TBB0 222 aa12.18□□□□□ -0.46
SSBP1-207ENST00000468267 ZNF586Q9NXT0 402 aa12.18□□□□□ -0.46
SSBP1-207ENST00000468267 TMEM14CQ9P0S9 112 aa12.18□□□□□ -0.46
SSBP1-207ENST00000468267 ZNF253O75346 499 aa12.17□□□□□ -0.46
SSBP1-207ENST00000468267 CLINT1Q14677 625 aa12.17□□□□□ -0.46
SSBP1-207ENST00000468267 GCSAMLQ5JQS6 135 aa12.17□□□□□ -0.46
SSBP1-207ENST00000468267 TMEM256Q8N2U0 113 aa12.17□□□□□ -0.46
SSBP1-207ENST00000468267 OR10J6PQ8NGY7 276 aa12.17□□□□□ -0.46
SSBP1-207ENST00000468267 MPC2O95563 127 aa12.16□□□□□ -0.46
SSBP1-207ENST00000468267 TSPOP30536 169 aa12.16□□□□□ -0.46
SSBP1-207ENST00000468267 CDKN1BP46527 198 aa12.16□□□□□ -0.46
SSBP1-207ENST00000468267 LINC01587Q99440 93 aa12.16□□□□□ -0.46
SSBP1-207ENST00000468267 NDUFAF3Q9BU61 184 aa12.16□□□□□ -0.46
SSBP1-207ENST00000468267 TRBV19A0A075B6N1 114 aa12.15□□□□□ -0.46
SSBP1-207ENST00000468267 HIST1H1EP10412 219 aaKnown RBP12.15□□□□□ -0.46
SSBP1-207ENST00000468267 AZU1P20160 251 aa12.15□□□□□ -0.46
SSBP1-207ENST00000468267 FAM210BQ96KR6 192 aa12.15□□□□□ -0.46
SSBP1-207ENST00000468267 WDR61Q9GZS3 305 aaKnown RBP12.15□□□□□ -0.46
SSBP1-207ENST00000468267 PET100P0DJ07 73 aa12.14□□□□□ -0.47
SSBP1-207ENST00000468267 TAS2R60P59551 318 aa12.14□□□□□ -0.47
SSBP1-207ENST00000468267 DAD1P61803 113 aa12.14□□□□□ -0.47
SSBP1-207ENST00000468267 MRPL53Q96EL3 112 aaKnown RBP12.14□□□□□ -0.47
SSBP1-207ENST00000468267 KCNIP2Q9NS61 270 aa12.14□□□□□ -0.47
SSBP1-207ENST00000468267 PLAC8L1A1L4L8 177 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 LYRM9A8MSI8 78 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 NDUFB4O95168 129 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 PYYP10082 97 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 PDE6HQ13956 83 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 KIR3DS1Q14943 382 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 FAM167A-AS1Q96KT0 104 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 ATP5SQ99766 215 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 C20orf144Q9BQM9 153 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 SLC25A2Q9BXI2 301 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 HSPB11Q9Y547 144 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 TIMM9Q9Y5J7 89 aa12.13□□□□□ -0.47
SSBP1-207ENST00000468267 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 HTN3P15516 51 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 RPL12P30050 165 aaKnown RBP12.12□□□□□ -0.47
SSBP1-207ENST00000468267 MIR17HGQ75NE6 70 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 BLNKQ8WV28 456 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 PARD6GQ9BYG4 376 aaPredicted RBP12.12□□□□□ -0.47
SSBP1-207ENST00000468267 PRELID1Q9Y255 219 aa12.12□□□□□ -0.47
SSBP1-207ENST00000468267 C17orf112F2Z3M2 114 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 H7BYZ3 331 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 M0R3E3 92 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 P0DMU3 169 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 FAM231AP0DMU4 169 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 FAM231CP0DMU5 169 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 HTN1P15515 57 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
SSBP1-207ENST00000468267 MBD2Q9UBB5 411 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
SSBP1-207ENST00000468267 DNAH2Q9P225 4427 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 HECTD4Q9Y4D8 3996 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 LEPP41159 167 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 FCN2Q15485 313 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 ZNF493Q6ZR52 646 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 C16orf74Q96GX8 76 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 FUT9Q9Y231 359 aa12.1□□□□□ -0.47
SSBP1-207ENST00000468267 PTTG1O95997 202 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 IFNA5P01569 189 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 NBEAP1P0C6P0 100 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 EXOC3-AS1Q8N2X6 119 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 POM121L12Q8N7R1 296 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 SCGB1C1Q8TD33 95 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 RNASE8Q8TDE3 154 aaKnown RBP12.09□□□□□ -0.47
SSBP1-207ENST00000468267 TMEM263Q8WUH6 116 aaKnown RBP12.09□□□□□ -0.47
SSBP1-207ENST00000468267 SMIM3Q9BZL3 60 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 OR51M1Q9H341 326 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 AAMDCQ9H7C9 122 aa12.09□□□□□ -0.47
SSBP1-207ENST00000468267 DNAH17Q9UFH2 4485 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 DEFB130BP0DP73 79 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 DEFB130AP0DP74 79 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 ERCC8Q13216 396 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 ICAM4Q14773 271 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 FXYD5Q96DB9 178 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 LINC00477Q96M19 166 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 WFDC1Q9HC57 220 aa12.08□□□□□ -0.48
SSBP1-207ENST00000468267 TIMM8BQ9Y5J9 83 aaPredicted RBP12.08□□□□□ -0.48
SSBP1-207ENST00000468267 TRAV12-3A0A0B4J271 114 aa12.07□□□□□ -0.48
SSBP1-207ENST00000468267 J3KRW8 73 aa12.07□□□□□ -0.48
SSBP1-207ENST00000468267 FFAR4Q5NUL3 377 aa12.07□□□□□ -0.48
SSBP1-207ENST00000468267 TMEM88Q6PEY1 159 aa12.07□□□□□ -0.48
SSBP1-207ENST00000468267 C9orf47Q6ZRZ4 202 aa12.07□□□□□ -0.48
SSBP1-207ENST00000468267 RNF141Q8WVD5 230 aa12.07□□□□□ -0.48
SSBP1-207ENST00000468267 AGPAT4-IT1Q9H0P7 198 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms