RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 EPDR1Q9UM22 224 aa4.44□□□□□ -1.7
USP39-213ENST00000467885 PKD1L1Q8TDX9 2849 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 LOC102723971A0A1B0GUV8 181 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 RAB19A4D1S5 217 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 GGTLC3B5MD39 225 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 PRAC2D3DTV9 90 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 M0R3E3 92 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 DNASE2O00115 360 aaPredicted RBP4.43□□□□□ -1.7
USP39-213ENST00000467885 ISLRO14498 428 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 SRP19P09132 144 aaKnown RBP4.43□□□□□ -1.7
USP39-213ENST00000467885 BMI1P35226 326 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 TFPI2P48307 235 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 MEOX2P50222 304 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 PPT1P50897 306 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 UBE2G2P60604 165 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 UBE2L3P68036 154 aaKnown RBP4.43□□□□□ -1.7
USP39-213ENST00000467885 PAFAH1B2P68402 229 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 PSG9Q00887 426 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 PDE6HQ13956 83 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 ICAM4Q14773 271 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 PSG3Q16557 428 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 ZNF506Q5JVG8 444 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 PRR31Q5SQ13 230 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 RBPMS2Q6ZRY4 209 aaKnown RBP4.43□□□□□ -1.7
USP39-213ENST00000467885 SLC7A5P1Q8MH63 180 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 EIF4E3Q8N5X7 224 aaKnown RBP4.43□□□□□ -1.7
USP39-213ENST00000467885 KRTAP4-11Q9BYQ6 195 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 Q9H3A6 140 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 VAX2Q9UIW0 290 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 KLF12Q9Y4X4 402 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 WNK1Q9H4A3 2382 aa4.43□□□□□ -1.7
USP39-213ENST00000467885 J3KRW8 73 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 NDUFS6O75380 124 aaKnown RBP4.42□□□□□ -1.7
USP39-213ENST00000467885 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 CD7P09564 240 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 PRB4P10163 310 aaPredicted RBP4.42□□□□□ -1.7
USP39-213ENST00000467885 BCL2P10415 239 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 ATP5G3P48201 142 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 DEFB1P60022 68 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 KRTAP10-11P60412 298 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 EGFEM1PQ0D2K5 195 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 CST9LP1Q5W188 147 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 IQCF2Q8IXL9 164 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 RNF182Q8N6D2 247 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 CLRN3Q8NCR9 226 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 RXFP4Q8TDU9 374 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 DYNLRB2Q8TF09 96 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 C16orf92Q96LL3 132 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 LINC00052Q96N35 136 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 SPAG8Q99932 426 aaPredicted RBP4.42□□□□□ -1.7
USP39-213ENST00000467885 TXNDC17Q9BRA2 123 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 NKX6-2Q9C056 277 aaPredicted RBP4.42□□□□□ -1.7
USP39-213ENST00000467885 SMDT1Q9H4I9 107 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 OTORQ9NRC9 128 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 CLEC5AQ9NY25 188 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 PRELID1Q9Y255 219 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 ARL2-SNX15V9GYD0 113 aa4.42□□□□□ -1.7
USP39-213ENST00000467885 DIRC3C9JPN6 131 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 C11orf94C9JXX5 98 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 F6UB75 175 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 TCRAP04437 139 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 ZNF705DP0CH99 300 aaPredicted RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 ZNF705BP0CI00 300 aaPredicted RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 TAGLN2P37802 199 aaKnown RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 ID1P41134 155 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 CMC4P56277 68 aaPredicted RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 DEFB131AP59861 70 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 GNG5P63218 68 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 MEF2BQ02080 365 aaPredicted RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 PEA15Q15121 130 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 GUCA2BQ16661 112 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 GDF5OSQ5U4N7 250 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 CFAP161Q6P656 301 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 RPUSD4Q96CM3 377 aaKnown RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 TVP23CQ96ET8 276 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 VGLL1Q99990 258 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 FAM110AQ9BQ89 295 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 SLC50A1Q9BRV3 221 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 EIF5A2Q9GZV4 153 aaKnown RBP4.41□□□□□ -1.7
USP39-213ENST00000467885 AGPAT4-IT1Q9H0P7 198 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 MANBALQ9NQG1 85 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 PPP1R14DQ9NXH3 145 aa4.41□□□□□ -1.7
USP39-213ENST00000467885 TRAV34A0A0B4J273 112 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 TMEM218A2RU14 115 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 OR4C46A6NHA9 309 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 A8MTW9 85 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 G3V4G9 280 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 H3BMM0 161 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 PDE6DO43924 150 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 SLC25A5P05141 298 aaKnown RBP4.4□□□□□ -1.71
USP39-213ENST00000467885 ZNF688P0C7X2 276 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 CT45A10P0DMU9 189 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 ERCC8Q13216 396 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 ZNF124Q15973 351 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 ODF3L2Q3SX64 289 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 TOR2AQ5JU69 321 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 C9orf47Q6ZRZ4 202 aa4.4□□□□□ -1.71
USP39-213ENST00000467885 ZNF575Q86XF7 245 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms