RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 RLN2P04090 185 aa15.83■□□□□ 0.12
USP42-205ENST00000465073 RAB31Q13636 194 aa15.83■□□□□ 0.12
USP42-205ENST00000465073 TTC32Q5I0X7 151 aa15.83■□□□□ 0.12
USP42-205ENST00000465073 MORN5Q5VZ52 161 aa15.83■□□□□ 0.12
USP42-205ENST00000465073 SAT2Q96F10 170 aaPredicted RBP15.83■□□□□ 0.12
USP42-205ENST00000465073 RBM38Q9H0Z9 239 aaKnown RBP15.83■□□□□ 0.12
USP42-205ENST00000465073 DNAJC4Q9NNZ3 241 aa15.83■□□□□ 0.12
USP42-205ENST00000465073 SNURFLB1AK76 121 aa15.82■□□□□ 0.12
USP42-205ENST00000465073 GUK1Q16774 197 aa15.82■□□□□ 0.12
USP42-205ENST00000465073 ODF3Q96PU9 254 aa15.82■□□□□ 0.12
USP42-205ENST00000465073 HSPG2P98160 4391 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 GAGE12BA1L429 117 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 H3BNG1 76 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 H3BQ15 152 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 L7N2F9 121 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 GAGE7O76087 117 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 GAGE12FP0CL80 117 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 GAGE12GP0CL81 117 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 GAGE12IP0CL82 117 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 LEPP41159 167 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 VAMP2P63027 116 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 Q6ZRG5 221 aa15.81■□□□□ 0.12
USP42-205ENST00000465073 SDHCQ99643 169 aaPredicted RBP15.81■□□□□ 0.12
USP42-205ENST00000465073 HOXA5P20719 270 aa15.8■□□□□ 0.12
USP42-205ENST00000465073 CAMLGP49069 296 aa15.8■□□□□ 0.12
USP42-205ENST00000465073 ZNF846Q147U1 533 aa15.8■□□□□ 0.12
USP42-205ENST00000465073 UPK3BQ9BT76 320 aa15.8■□□□□ 0.12
USP42-205ENST00000465073 A0A0J9YY99 117 aa15.79■□□□□ 0.12
USP42-205ENST00000465073 CT45A10P0DMU9 189 aa15.79■□□□□ 0.12
USP42-205ENST00000465073 NRARPQ7Z6K4 114 aa15.79■□□□□ 0.12
USP42-205ENST00000465073 PYGO2Q9BRQ0 406 aa15.79■□□□□ 0.12
USP42-205ENST00000465073 Q9H3A6 140 aa15.79■□□□□ 0.12
USP42-205ENST00000465073 TRAV12-3A0A0B4J271 114 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 NPIPB6E9PJ23 425 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 DAZ2Q13117 558 aaKnown RBP15.78■□□□□ 0.12
USP42-205ENST00000465073 ESRGQ1W209 222 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 MAPKAPK5-AS1Q8N8E1 139 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 OR1L4Q8NGR5 311 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 A0A1W2PPQ1 181 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 J3KRW8 73 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 BCAP31P51572 246 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 ZNF431Q8TF32 576 aaPredicted RBP15.78■□□□□ 0.12
USP42-205ENST00000465073 PFDN5Q99471 154 aa15.78■□□□□ 0.12
USP42-205ENST00000465073 TRAV5A0A0B4J249 113 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 ZNF253O75346 499 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 IL7P13232 177 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 CAV2P51636 162 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 MIC13Q5XKP0 118 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 SPATA12Q7Z6I5 190 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 KRTAP1-5Q9BYS1 174 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 WDR83OSQ9Y284 106 aa15.77■□□□□ 0.11
USP42-205ENST00000465073 MRPS16Q9Y3D3 137 aaKnown RBP15.77■□□□□ 0.11
USP42-205ENST00000465073 LSM5Q9Y4Y9 91 aaKnown RBP15.77■□□□□ 0.11
USP42-205ENST00000465073 CCSO14618 274 aa15.76■□□□□ 0.11
USP42-205ENST00000465073 CST7O76096 145 aa15.76■□□□□ 0.11
USP42-205ENST00000465073 BTF3P20290 206 aaKnown RBP15.76■□□□□ 0.11
USP42-205ENST00000465073 C12orf45Q8N5I9 185 aaPredicted RBP15.76■□□□□ 0.11
USP42-205ENST00000465073 C20orf85Q9H1P6 137 aa15.76■□□□□ 0.11
USP42-205ENST00000465073 UQCC1Q9NVA1 299 aa15.76■□□□□ 0.11
USP42-205ENST00000465073 ZNF586Q9NXT0 402 aa15.76■□□□□ 0.11
USP42-205ENST00000465073 FAM25EA8MYX2 175 aa15.75■□□□□ 0.11
USP42-205ENST00000465073 Q6ZTI0 123 aa15.75■□□□□ 0.11
USP42-205ENST00000465073 MRPL53Q96EL3 112 aaKnown RBP15.75■□□□□ 0.11
USP42-205ENST00000465073 TMPRSS5Q9H3S3 457 aa15.75■□□□□ 0.11
USP42-205ENST00000465073 SLC25A5P05141 298 aaKnown RBP15.74■□□□□ 0.11
USP42-205ENST00000465073 RPL29P47914 159 aaKnown RBP15.74■□□□□ 0.11
USP42-205ENST00000465073 VWC2Q2TAL6 325 aa15.74■□□□□ 0.11
USP42-205ENST00000465073 LRP1BQ9NZR2 4599 aa15.73■□□□□ 0.11
USP42-205ENST00000465073 C5orf51A6NDU8 294 aa15.73■□□□□ 0.11
USP42-205ENST00000465073 ZNF680Q8NEM1 530 aa15.73■□□□□ 0.11
USP42-205ENST00000465073 C11orf1Q9H5F2 150 aa15.73■□□□□ 0.11
USP42-205ENST00000465073 SLC39A9Q9NUM3 307 aa15.73■□□□□ 0.11
USP42-205ENST00000465073 TRBV19A0A075B6N1 114 aa15.72■□□□□ 0.11
USP42-205ENST00000465073 C7orf71A4D174 169 aa15.72■□□□□ 0.11
USP42-205ENST00000465073 FAM24AA6NFZ4 105 aa15.72■□□□□ 0.11
USP42-205ENST00000465073 PVALBP20472 110 aaPredicted RBP15.72■□□□□ 0.11
USP42-205ENST00000465073 S100A11P31949 105 aa15.72■□□□□ 0.11
USP42-205ENST00000465073 CHAC2Q8WUX2 184 aa15.72■□□□□ 0.11
USP42-205ENST00000465073 C18orf15Q96N68 181 aa15.72■□□□□ 0.11
USP42-205ENST00000465073 TRGV2A0A075B6R0 118 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 PLA2G10O15496 165 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 VSIG2Q96IQ7 327 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 C2orf50Q96LR7 162 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 LINC00477Q96M19 166 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 LINC00467Q9BRT7 94 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 GSN-AS1Q9NRJ2 163 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 TMEM14CQ9P0S9 112 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 PRELID1Q9Y255 219 aa15.71■□□□□ 0.11
USP42-205ENST00000465073 ERCC8Q13216 396 aa15.71■□□□□ 0.1
USP42-205ENST00000465073 Q8N1X5 172 aa15.71■□□□□ 0.1
USP42-205ENST00000465073 C11orf72Q8NBR9 251 aa15.71■□□□□ 0.1
USP42-205ENST00000465073 KLLNB2CW77 178 aa15.7■□□□□ 0.1
USP42-205ENST00000465073 M0R3E3 92 aa15.7■□□□□ 0.1
USP42-205ENST00000465073 LYRM1O43325 122 aa15.7■□□□□ 0.1
USP42-205ENST00000465073 ZNF324O75467 553 aaPredicted RBP15.7■□□□□ 0.1
USP42-205ENST00000465073 TCRBP04435 133 aa15.7■□□□□ 0.1
USP42-205ENST00000465073 HIST1H1EP10412 219 aaKnown RBP15.7■□□□□ 0.1
USP42-205ENST00000465073 SULT1A1P50225 295 aa15.7■□□□□ 0.1
USP42-205ENST00000465073 BAXQ07812 192 aa15.7■□□□□ 0.1
USP42-205ENST00000465073 ANXA2RQ3ZCQ2 193 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms